36 items (Populus trichocarpa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2K1YAY9	Uncharacterized protein. (340 aa)
	A0A2K1YE56	Uncharacterized protein. (373 aa)
	A0A2K1WW98	Homeobox domain-containing protein. (553 aa)
	A0A2K1YNT5	Uncharacterized protein. (309 aa)
	A0A2K1Z0U8	Homeobox domain-containing protein. (811 aa)
	A0A2K2AA54	Uncharacterized protein. (317 aa)
	A0A2K2AVE8	Homeobox domain-containing protein. (676 aa)
	A0A2K2BCP0	Homeobox domain-containing protein. (448 aa)
	A0A2K2BV97	Homeobox domain-containing protein. (657 aa)
	A0A3N7FTU0	Uncharacterized protein. (317 aa)
	A0A3N7GHG6	Homeobox domain-containing protein. (462 aa)
	A9P848_POPTR	Uncharacterized protein. (301 aa)
	B9GHM6_POPTR	Homeobox domain-containing protein. (732 aa)
	KNOX	KNOX transcription factor. (368 aa)
	B9HAN9_POPTR	Uncharacterized protein. (338 aa)
	B9H697_POPTR	Homeobox domain-containing protein. (825 aa)
	A0A2K2BCN5	Homeobox domain-containing protein. (704 aa)
	A0A2K2AY55	Homeobox domain-containing protein. (833 aa)
	A0A2K2AY44	Uncharacterized protein. (268 aa)
	U5GJA2_POPTR	Homeobox domain-containing protein. (664 aa)
	B9N8F4_POPTR	Uncharacterized protein. (369 aa)
	B9IMJ9_POPTR	Uncharacterized protein. (334 aa)
	A0A2K1Z190	Homeobox domain-containing protein. (735 aa)
	B9IIL1_POPTR	Homeobox domain-containing protein. (679 aa)
	B9I6Z3_POPTR	Uncharacterized protein. (320 aa)
	B9HT49_POPTR	Homeobox domain-containing protein. (479 aa)
	B9HQD0_POPTR	Homeobox domain-containing protein. (835 aa)
	B9HLS5_POPTR	Uncharacterized protein. (312 aa)
	A0A2K1Z6R3	Homeobox domain-containing protein. (675 aa)
	A0A2K1ZCP0	Homeobox domain-containing protein. (477 aa)
	A0A2K1ZNK1	Homeobox domain-containing protein. (824 aa)
	A0A2K2A587	Homeobox domain-containing protein. (678 aa)
	A0A2K2A6V1	Homeobox domain-containing protein. (600 aa)
	A0A2K1WUN8	Uncharacterized protein. (425 aa)
	A0A2K2A8G8	Uncharacterized protein. (432 aa)
	A0A2K1XJR1	Uncharacterized protein. (347 aa)

Your Current Organism:

Populus trichocarpa

NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2K1WW98	A0A2K1YE56	A0A2K1WW98	A0A2K1YE56	Homeobox domain-containing protein.	Uncharacterized protein.	0.469
A0A2K1WW98	B9N8F4_POPTR	A0A2K1WW98	B9N8F4	Homeobox domain-containing protein.	Uncharacterized protein.	0.473
A0A2K1XJR1	A0A2K1ZCP0	A0A2K1XJR1	A0A2K1ZCP0	Uncharacterized protein.	Homeobox domain-containing protein.	0.455
A0A2K1YAY9	A0A2K1ZCP0	A0A2K1YAY9	A0A2K1ZCP0	Uncharacterized protein.	Homeobox domain-containing protein.	0.454
A0A2K1YE56	A0A2K1WW98	A0A2K1YE56	A0A2K1WW98	Uncharacterized protein.	Homeobox domain-containing protein.	0.469
A0A2K1YE56	A0A2K1ZCP0	A0A2K1YE56	A0A2K1ZCP0	Uncharacterized protein.	Homeobox domain-containing protein.	0.661
A0A2K1YE56	A0A2K2A6V1	A0A2K1YE56	A0A2K2A6V1	Uncharacterized protein.	Homeobox domain-containing protein.	0.460
A0A2K1YE56	A0A2K2BV97	A0A2K1YE56	A0A2K2BV97	Uncharacterized protein.	Homeobox domain-containing protein.	0.422
A0A2K1YE56	U5GJA2_POPTR	A0A2K1YE56	U5GJA2	Uncharacterized protein.	Homeobox domain-containing protein.	0.424
A0A2K1YNT5	A0A2K1ZCP0	A0A2K1YNT5	A0A2K1ZCP0	Uncharacterized protein.	Homeobox domain-containing protein.	0.444
A0A2K1ZCP0	A0A2K1XJR1	A0A2K1ZCP0	A0A2K1XJR1	Homeobox domain-containing protein.	Uncharacterized protein.	0.455
A0A2K1ZCP0	A0A2K1YAY9	A0A2K1ZCP0	A0A2K1YAY9	Homeobox domain-containing protein.	Uncharacterized protein.	0.454
A0A2K1ZCP0	A0A2K1YE56	A0A2K1ZCP0	A0A2K1YE56	Homeobox domain-containing protein.	Uncharacterized protein.	0.661
A0A2K1ZCP0	A0A2K1YNT5	A0A2K1ZCP0	A0A2K1YNT5	Homeobox domain-containing protein.	Uncharacterized protein.	0.444
A0A2K1ZCP0	A0A2K2AA54	A0A2K1ZCP0	A0A2K2AA54	Homeobox domain-containing protein.	Uncharacterized protein.	0.451
A0A2K1ZCP0	A0A3N7FTU0	A0A2K1ZCP0	A0A3N7FTU0	Homeobox domain-containing protein.	Uncharacterized protein.	0.452
A0A2K1ZCP0	B9HLS5_POPTR	A0A2K1ZCP0	B9HLS5	Homeobox domain-containing protein.	Uncharacterized protein.	0.444
A0A2K1ZCP0	B9I6Z3_POPTR	A0A2K1ZCP0	B9I6Z3	Homeobox domain-containing protein.	Uncharacterized protein.	0.450
A0A2K1ZCP0	B9N8F4_POPTR	A0A2K1ZCP0	B9N8F4	Homeobox domain-containing protein.	Uncharacterized protein.	0.663
A0A2K1ZCP0	KNOX	A0A2K1ZCP0	B9GNK1	Homeobox domain-containing protein.	KNOX transcription factor.	0.813

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