STRINGSTRING
A9P8R3_POPTR A9P8R3_POPTR A0A2K1XR14 A0A2K1XR14 A0A2K1YQ82 A0A2K1YQ82 A0A2K2A273 A0A2K2A273 A0A2K2BIQ2 A0A2K2BIQ2 A0A3N7G130 A0A3N7G130 B9GPA4_POPTR B9GPA4_POPTR B9GPA5_POPTR B9GPA5_POPTR B9HL67_POPTR B9HL67_POPTR U5GMD2_POPTR U5GMD2_POPTR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A9P8R3_POPTRMalate dehydrogenase. (332 aa)
A0A2K1XR14Ldh_1_N domain-containing protein. (136 aa)
A0A2K1YQ82Malate dehydrogenase. (332 aa)
A0A2K2A273Ldh_1_C domain-containing protein. (50 aa)
A0A2K2BIQ2Malate dehydrogenase. (364 aa)
A0A3N7G130Ldh_1_C domain-containing protein. (68 aa)
B9GPA4_POPTRUncharacterized protein. (81 aa)
B9GPA5_POPTRMalate dehydrogenase. (334 aa)
B9HL67_POPTRUncharacterized protein. (442 aa)
U5GMD2_POPTRLdh_1_C domain-containing protein. (68 aa)
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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