STRINGSTRING
A0A3N7EHF0 A0A3N7EHF0 POPTR_T118600 POPTR_T118600 A0A2K1WN60 A0A2K1WN60 A0A2K1X0C5 A0A2K1X0C5 A0A2K1XBR1 A0A2K1XBR1 A0A2K1Y0Z5 A0A2K1Y0Z5 A0A2K1YKW1 A0A2K1YKW1 A0A2K1ZYA0 A0A2K1ZYA0 A0A2K2B4E9 A0A2K2B4E9 A0A2K2B642 A0A2K2B642 A0A2K2BD10 A0A2K2BD10 A0A2K2CD07 A0A2K2CD07 A0A3N7EIX8 A0A3N7EIX8 A0A3N7G994 A0A3N7G994 A9PA83_POPTR A9PA83_POPTR B9GUY7_POPTR B9GUY7_POPTR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A3N7EHF0Uncharacterized protein. (901 aa)
POPTR_T118600Uncharacterized protein. (1147 aa)
A0A2K1WN60Uncharacterized protein. (1267 aa)
A0A2K1X0C5Bifunctional lysine-specific demethylase and histidyl-hydroxylase; Oxygenase that can act as both a histone lysine demethylase and a ribosomal histidine hydroxylase. (791 aa)
A0A2K1XBR1Uncharacterized protein. (502 aa)
A0A2K1Y0Z5Uncharacterized protein. (1264 aa)
A0A2K1YKW1Uncharacterized protein. (1025 aa)
A0A2K1ZYA0Bifunctional lysine-specific demethylase and histidyl-hydroxylase; Oxygenase that can act as both a histone lysine demethylase and a ribosomal histidine hydroxylase. (473 aa)
A0A2K2B4E9Uncharacterized protein. (873 aa)
A0A2K2B642Uncharacterized protein. (1856 aa)
A0A2K2BD10Uncharacterized protein. (806 aa)
A0A2K2CD07Uncharacterized protein. (1128 aa)
A0A3N7EIX8Uncharacterized protein. (61 aa)
A0A3N7G994Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (92 aa)
A9PA83_POPTRHistone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
B9GUY7_POPTRUncharacterized protein. (978 aa)
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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