38 items (Populus trichocarpa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	B9NAU7_POPTR	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (380 aa)
	A0A2K1WTM0	Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. (645 aa)
	A0A2K1WYK9	Uncharacterized protein. (577 aa)
	A0A2K1X4B8	SWIB domain-containing protein. (547 aa)
	A0A2K1XIB9	Uncharacterized protein; Belongs to the actin family. (420 aa)
	A0A2K1XND1	Uncharacterized protein. (95 aa)
	A0A2K1Y9P6	Uncharacterized protein; Belongs to the actin family. (441 aa)
	A0A2K1YLW0	Uncharacterized protein. (244 aa)
	A0A2K1YMA8	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (558 aa)
	A0A2K1YTQ9	J domain-containing protein. (724 aa)
	A0A2K1Z4W8	Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Belongs to the glycosyl hydrolase 16 family. (294 aa)
	A0A2K1ZLG4	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (430 aa)
	A0A2K2A9I6	Uncharacterized protein. (397 aa)
	A0A2K2A9J2	Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. (587 aa)
	A0A2K2B376	Protein arginine N-methyltransferase; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA). (740 aa)
	A0A2K2BJ69	GH16 domain-containing protein. (213 aa)
	A0A2K2BYE6	Uncharacterized protein. (145 aa)
	A0A2K2C3P4	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (275 aa)
	A0A3N7E9C5	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (635 aa)
	A0A3N7EIX8	Uncharacterized protein. (61 aa)
	A0A3N7F6M2	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (393 aa)
	POPTR_T170800	J domain-containing protein. (116 aa)
	A0A3N7FX31	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (210 aa)
	A0A3N7FX80	Uncharacterized protein. (127 aa)
	A0A3N7G994	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (92 aa)
	A0A3N7HDW8	Uncharacterized protein. (146 aa)
	A9PA83_POPTR	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
	A9PDI4_POPTR	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (270 aa)
	A9PH18_POPTR	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (384 aa)
	A9PH61_POPTR	Uncharacterized protein. (453 aa)
	A9PH95_POPTR	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (311 aa)
	B9GJS7_POPTR	SWIB domain-containing protein. (555 aa)
	B9HBP4_POPTR	Uncharacterized protein. (536 aa)
	B9HG92_POPTR	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (405 aa)
	B9HIS3_POPTR	J domain-containing protein. (695 aa)
	B9I3Q3_POPTR	SWIB domain-containing protein. (536 aa)
	B9IFA0_POPTR	SWIB domain-containing protein. (538 aa)
	B9II72_POPTR	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (276 aa)

Your Current Organism:

Populus trichocarpa

NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2K1WTM0	A0A2K1XIB9	A0A2K1WTM0	A0A2K1XIB9	Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.	Uncharacterized protein; Belongs to the actin family.	0.696
A0A2K1WTM0	A0A2K1Y9P6	A0A2K1WTM0	A0A2K1Y9P6	Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.	Uncharacterized protein; Belongs to the actin family.	0.696
A0A2K1WTM0	A0A2K1YLW0	A0A2K1WTM0	A0A2K1YLW0	Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.	Uncharacterized protein.	0.613
A0A2K1WTM0	A0A2K1YMA8	A0A2K1WTM0	A0A2K1YMA8	Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.400
A0A2K1WTM0	A0A2K1YTQ9	A0A2K1WTM0	A0A2K1YTQ9	Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.	J domain-containing protein.	0.613
A0A2K1WTM0	A0A2K1Z4W8	A0A2K1WTM0	A0A2K1Z4W8	Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.	Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Belongs to the glycosyl hydrolase 16 family.	0.400
A0A2K1WTM0	A0A2K1ZLG4	A0A2K1WTM0	A0A2K1ZLG4	Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.400
A0A2K1WTM0	A0A2K2BJ69	A0A2K1WTM0	A0A2K2BJ69	Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.	GH16 domain-containing protein.	0.400
A0A2K1WTM0	A0A3N7EIX8	A0A2K1WTM0	A0A3N7EIX8	Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.	Uncharacterized protein.	0.878
A0A2K1WTM0	A0A3N7G994	A0A2K1WTM0	A0A3N7G994	Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.878
A0A2K1WTM0	A9PA83_POPTR	A0A2K1WTM0	A9PA83	Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.878
A0A2K1WTM0	A9PH61_POPTR	A0A2K1WTM0	A9PH61	Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.	Uncharacterized protein.	0.645
A0A2K1WTM0	B9HIS3_POPTR	A0A2K1WTM0	B9HIS3	Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.	J domain-containing protein.	0.613
A0A2K1WTM0	B9NAU7_POPTR	A0A2K1WTM0	B9NAU7	Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.445
A0A2K1WTM0	POPTR_T170800	A0A2K1WTM0	A0A3N7FH87	Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.	J domain-containing protein.	0.613
A0A2K1WYK9	A0A2K1XND1	A0A2K1WYK9	A0A2K1XND1	Uncharacterized protein.	Uncharacterized protein.	0.650
A0A2K1WYK9	A0A2K1YMA8	A0A2K1WYK9	A0A2K1YMA8	Uncharacterized protein.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.413
A0A2K1WYK9	A0A2K1Z4W8	A0A2K1WYK9	A0A2K1Z4W8	Uncharacterized protein.	Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Belongs to the glycosyl hydrolase 16 family.	0.413
A0A2K1WYK9	A0A2K1ZLG4	A0A2K1WYK9	A0A2K1ZLG4	Uncharacterized protein.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.413
A0A2K1WYK9	A0A2K2B376	A0A2K1WYK9	A0A2K2B376	Uncharacterized protein.	Protein arginine N-methyltransferase; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA).	0.650

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