STRINGSTRING
A0A2K2B417 A0A2K2B417 A9PA83_POPTR A9PA83_POPTR A9P8Q5_POPTR A9P8Q5_POPTR A9P8M2_POPTR A9P8M2_POPTR A9P863_POPTR A9P863_POPTR A0A3N7HME5 A0A3N7HME5 A0A3N7GHC3 A0A3N7GHC3 A0A3N7G994 A0A3N7G994 A0A3N7FII9 A0A3N7FII9 A0A3N7ELV5 A0A3N7ELV5 A0A3N7EIX8 A0A3N7EIX8 A0A2K2CBJ4 A0A2K2CBJ4 A0A2K2C1A8 A0A2K2C1A8 A0A2K2BXI0 A0A2K2BXI0 A0A2K2AS36 A0A2K2AS36 A0A2K2AK99 A0A2K2AK99 A0A2K1ZWQ0 A0A2K1ZWQ0 A0A2K1YC75 A0A2K1YC75 A0A2K1XN87 A0A2K1XN87 U5GKP7_POPTR U5GKP7_POPTR U5GCI2_POPTR U5GCI2_POPTR U5G1M0_POPTR U5G1M0_POPTR U5FMJ8_POPTR U5FMJ8_POPTR U5FKY2_POPTR U5FKY2_POPTR B9N576_POPTR B9N576_POPTR B9IND8_POPTR B9IND8_POPTR B9I013_POPTR B9I013_POPTR B9HUV8_POPTR B9HUV8_POPTR B9GFJ5_POPTR B9GFJ5_POPTR A9PDD5_POPTR A9PDD5_POPTR A9PC90_POPTR A9PC90_POPTR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A2K2B417Uncharacterized protein. (69 aa)
A9PA83_POPTRHistone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
A9P8Q5_POPTRHistone H2B; Belongs to the histone H2B family. (139 aa)
A9P8M2_POPTRUbiquitin-like domain-containing protein. (156 aa)
A9P863_POPTRUbiquitin-like domain-containing protein. (156 aa)
A0A3N7HME5Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (3036 aa)
A0A3N7GHC3Histone H2B; Belongs to the histone H2B family. (230 aa)
A0A3N7G994Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (92 aa)
A0A3N7FII9Histone H2B; Belongs to the histone H2B family. (148 aa)
A0A3N7ELV5Ubiquitin-like domain-containing protein. (202 aa)
A0A3N7EIX8Uncharacterized protein. (61 aa)
A0A2K2CBJ4Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (730 aa)
A0A2K2C1A8Histone domain-containing protein; Belongs to the histone H2B family. (163 aa)
A0A2K2BXI0Uncharacterized protein. (322 aa)
A0A2K2AS36Histone H2B; Belongs to the histone H2B family. (149 aa)
A0A2K2AK99Protein kinase domain-containing protein. (536 aa)
A0A2K1ZWQ0Ubiquitin-like domain-containing protein. (147 aa)
A0A2K1YC75Ubiquitin-like domain-containing protein. (203 aa)
A0A2K1XN87FHA domain-containing protein. (517 aa)
U5GKP7_POPTRHistone H2B; Belongs to the histone H2B family. (147 aa)
U5GCI2_POPTRHistone H2B; Belongs to the histone H2B family. (148 aa)
U5G1M0_POPTRHistone H2B; Belongs to the histone H2B family. (145 aa)
U5FMJ8_POPTRUbiquitin-like domain-containing protein. (156 aa)
U5FKY2_POPTRUbiquitin-like domain-containing protein. (123 aa)
B9N576_POPTRChlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. (263 aa)
B9IND8_POPTRUncharacterized protein. (259 aa)
B9I013_POPTRChlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. (231 aa)
B9HUV8_POPTRHistone H2B; Belongs to the histone H2B family. (140 aa)
B9GFJ5_POPTRZinc-hook domain-containing protein. (1316 aa)
A9PDD5_POPTRHistone H2B; Belongs to the histone H2B family. (143 aa)
A9PC90_POPTRHistone H2B; Belongs to the histone H2B family. (139 aa)
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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