89 items (Populus trichocarpa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	POPTR_T030400	Uncharacterized protein. (646 aa)
	A0A2K1WVQ8	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (721 aa)
	A0A2K1X521	Structural maintenance of chromosomes protein. (1294 aa)
	A0A2K1XH10	Nuclear pore protein. (863 aa)
	A0A2K1XHH1	Uncharacterized protein. (1322 aa)
	A0A2K1XM72	Protein kinase domain-containing protein. (1209 aa)
	A0A2K1YCS4	Protein kinase domain-containing protein. (1193 aa)
	A0A2K1YGS2	FCP1 homology domain-containing protein. (292 aa)
	A0A2K1YH10	FCP1 homology domain-containing protein. (483 aa)
	A0A2K1YKI5	Peptidase S59 domain-containing protein. (1019 aa)
	A0A2K1ZA18	Uncharacterized protein. (109 aa)
	A0A2K1ZA20	Uncharacterized protein. (1308 aa)
	A0A2K1ZD17	Uncharacterized protein. (802 aa)
	A0A2K1ZD32	FCP1 homology domain-containing protein. (295 aa)
	A0A2K1ZGP8	Uncharacterized protein. (1494 aa)
	A0A2K1ZLB4	Uncharacterized protein. (645 aa)
	A0A2K1ZPT1	Uncharacterized protein. (1223 aa)
	A0A2K2A7A5	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (227 aa)
	A0A2K2AP47	C2H2-type domain-containing protein. (407 aa)
	A0A2K2AQP5	FCP1 homology domain-containing protein. (356 aa)
	A0A2K2AS36	Histone H2B; Belongs to the histone H2B family. (149 aa)
	A0A2K2AT33	Uncharacterized protein. (114 aa)
	A0A2K2B5V5	RanBD1 domain-containing protein. (474 aa)
	A0A2K2BSG6	Uncharacterized protein. (132 aa)
	A0A2K2BU46	DUF5311 domain-containing protein. (1511 aa)
	A0A2K2C1A8	Histone domain-containing protein; Belongs to the histone H2B family. (163 aa)
	A0A2K2C870	Uncharacterized protein. (1948 aa)
	A0A2K2C8U6	FCP1 homology domain-containing protein. (519 aa)
	A0A2K2CDL0	Peptidase S59 domain-containing protein. (1063 aa)
	A0A3N7E902	RanBD1 domain-containing protein. (465 aa)
	A0A3N7E9U5	FCP1 homology domain-containing protein. (481 aa)
	A0A3N7EIX8	Uncharacterized protein. (61 aa)
	A0A3N7EKX7	Uncharacterized protein. (1150 aa)
	A0A3N7EVQ4	Uncharacterized protein. (237 aa)
	A0A3N7F2H4	Uncharacterized protein. (1884 aa)
	POPTR_T007401	Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family. (104 aa)
	A0A3N7FHU1	Nup54 domain-containing protein. (149 aa)
	A0A3N7FII9	Histone H2B; Belongs to the histone H2B family. (148 aa)
	A0A3N7FJX5	Uncharacterized protein. (1971 aa)
	A0A3N7FL07	Uncharacterized protein. (204 aa)
	A0A3N7FM24	Uncharacterized protein. (141 aa)
	A0A3N7FQ96	Cnd1 domain-containing protein. (1131 aa)
	A0A3N7FRR8	Uncharacterized protein. (106 aa)
	A0A3N7FRS0	Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family. (104 aa)
	A0A3N7G7W1	Nup54 domain-containing protein. (217 aa)
	A0A3N7G994	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (92 aa)
	A0A3N7GHC3	Histone H2B; Belongs to the histone H2B family. (230 aa)
	A0A3N7GSG1	TPR_MLP1_2 domain-containing protein. (2086 aa)
	A0A3N7HC91	Uncharacterized protein. (1296 aa)
	A0A3N7HHK3	Uncharacterized protein. (724 aa)
	A9P8Q5_POPTR	Histone H2B; Belongs to the histone H2B family. (139 aa)
	A9P990_POPTR	Histone H2A; Belongs to the histone H2A family. (137 aa)
	A9PA83_POPTR	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
	A9PBA3_POPTR	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (325 aa)
	A9PC90_POPTR	Histone H2B; Belongs to the histone H2B family. (139 aa)
	A9PDD5_POPTR	Histone H2B; Belongs to the histone H2B family. (143 aa)
	A9PFC1_POPTR	Uncharacterized protein. (449 aa)
	A9PG14_POPTR	Histone H2A; Belongs to the histone H2A family. (139 aa)
	A9PIK3_POPTR	Histone H2A; Belongs to the histone H2A family. (134 aa)
	B9GGL5_POPTR	Nuclear pore complex protein NUP35. (329 aa)
	B9GL77_POPTR	Uncharacterized protein. (67 aa)
	B9GMC9_POPTR	WD_REPEATS_REGION domain-containing protein. (371 aa)
	B9GVI5_POPTR	Peptidase S59 domain-containing protein. (1067 aa)
	B9GZZ4_POPTR	FCP1 homology domain-containing protein. (483 aa)
	B9H0B7_POPTR	WD_REPEATS_REGION domain-containing protein. (349 aa)
	B9HCX1_POPTR	FCP1 homology domain-containing protein. (325 aa)
	B9HT86_POPTR	Nup54 domain-containing protein. (384 aa)
	B9HUV8_POPTR	Histone H2B; Belongs to the histone H2B family. (140 aa)
	B9I075_POPTR	C2H2-type domain-containing protein. (439 aa)
	B9I2Z1_POPTR	Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family. (267 aa)
	B9I510_POPTR	Nuclear pore protein. (863 aa)
	B9IG99_POPTR	FCP1 homology domain-containing protein. (292 aa)
	B9IIW4_POPTR	LNS2 domain-containing protein. (898 aa)
	B9IJV5_POPTR	Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family. (261 aa)
	B9IKT5_POPTR	Histone H2A; Belongs to the histone H2A family. (134 aa)
	GATC	Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). (141 aa)
	B9N1C1_POPTR	Uncharacterized protein. (211 aa)
	U5FJF8_POPTR	Histone H2A; Belongs to the histone H2A family. (134 aa)
	U5FRD4_POPTR	LNS2 domain-containing protein. (1073 aa)
	U5FSG3_POPTR	Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family. (270 aa)
	U5FZ97_POPTR	FCP1 homology domain-containing protein. (294 aa)
	U5G1M0_POPTR	Histone H2B; Belongs to the histone H2B family. (145 aa)
	U5G263_POPTR	Uncharacterized protein. (807 aa)
	U5G8B3_POPTR	LNS2 domain-containing protein. (901 aa)
	U5GCI2_POPTR	Histone H2B; Belongs to the histone H2B family. (148 aa)
	U5GKP7_POPTR	Histone H2B; Belongs to the histone H2B family. (147 aa)
	U5GTD5_POPTR	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (1092 aa)
	U5GX07_POPTR	C2H2-type domain-containing protein. (440 aa)
	U7DZ86_POPTR	Uncharacterized protein. (150 aa)

Your Current Organism:

Populus trichocarpa

NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2K1WVQ8	A0A2K1XH10	A0A2K1WVQ8	A0A2K1XH10	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Nuclear pore protein.	0.969
A0A2K1WVQ8	A0A2K1XHH1	A0A2K1WVQ8	A0A2K1XHH1	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.418
A0A2K1WVQ8	A0A2K1YKI5	A0A2K1WVQ8	A0A2K1YKI5	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Peptidase S59 domain-containing protein.	0.916
A0A2K1WVQ8	A0A2K1ZA18	A0A2K1WVQ8	A0A2K1ZA18	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.888
A0A2K1WVQ8	A0A2K1ZA20	A0A2K1WVQ8	A0A2K1ZA20	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.888
A0A2K1WVQ8	A0A2K1ZD17	A0A2K1WVQ8	A0A2K1ZD17	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.971
A0A2K1WVQ8	A0A2K1ZGP8	A0A2K1WVQ8	A0A2K1ZGP8	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.974
A0A2K1WVQ8	A0A2K2AP47	A0A2K1WVQ8	A0A2K2AP47	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	C2H2-type domain-containing protein.	0.949
A0A2K1WVQ8	A0A2K2AT33	A0A2K1WVQ8	A0A2K2AT33	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.849
A0A2K1WVQ8	A0A2K2B5V5	A0A2K1WVQ8	A0A2K2B5V5	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	RanBD1 domain-containing protein.	0.793
A0A2K1WVQ8	A0A2K2BSG6	A0A2K1WVQ8	A0A2K2BSG6	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.924
A0A2K1WVQ8	A0A2K2BU46	A0A2K1WVQ8	A0A2K2BU46	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	DUF5311 domain-containing protein.	0.990
A0A2K1WVQ8	A0A2K2C870	A0A2K1WVQ8	A0A2K2C870	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.931
A0A2K1WVQ8	A0A2K2CDL0	A0A2K1WVQ8	A0A2K2CDL0	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Peptidase S59 domain-containing protein.	0.917
A0A2K1WVQ8	A0A3N7E902	A0A2K1WVQ8	A0A3N7E902	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	RanBD1 domain-containing protein.	0.793
A0A2K1WVQ8	A0A3N7EVQ4	A0A2K1WVQ8	A0A3N7EVQ4	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.896
A0A2K1WVQ8	A0A3N7F2H4	A0A2K1WVQ8	A0A3N7F2H4	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.988
A0A2K1WVQ8	A0A3N7FHU1	A0A2K1WVQ8	A0A3N7FHU1	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Nup54 domain-containing protein.	0.961
A0A2K1WVQ8	A0A3N7FJX5	A0A2K1WVQ8	A0A3N7FJX5	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.896
A0A2K1WVQ8	A0A3N7FRR8	A0A2K1WVQ8	A0A3N7FRR8	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.974

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