STRINGSTRING
A0A2K1ZTC1 A0A2K1ZTC1 A0A2K1ZSL0 A0A2K1ZSL0 A0A2K1ZI73 A0A2K1ZI73 A0A2K1ZHM3 A0A2K1ZHM3 A0A2K1ZBJ8 A0A2K1ZBJ8 A0A2K1ZAY4 A0A2K1ZAY4 A0A2K1Z7B9 A0A2K1Z7B9 A0A2K1Z5I7 A0A2K1Z5I7 A0A2K1YYB3 A0A2K1YYB3 A0A2K1YSH6 A0A2K1YSH6 A0A2K1YFR6 A0A2K1YFR6 A0A2K1YFN8 A0A2K1YFN8 A0A2K1YD70 A0A2K1YD70 A0A2K1Y8B0 A0A2K1Y8B0 A0A2K1Y5L9 A0A2K1Y5L9 A0A2K1XYT2 A0A2K1XYT2 A0A2K1XFA9 A0A2K1XFA9 A0A2K1XE81 A0A2K1XE81 A0A2K1X9V4 A0A2K1X9V4 A0A2K1X961 A0A2K1X961 A0A2K1X2Q6 A0A2K1X2Q6 A0A2K1WZ81 A0A2K1WZ81 A0A2K1WZ72 A0A2K1WZ72 A0A2K1WZ64 A0A2K1WZ64 A0A2K1WYV8 A0A2K1WYV8 A0A2K1WUG2 A0A2K1WUG2 A0A2K1WUE8 A0A2K1WUE8 A0A2K1WNL2 A0A2K1WNL2 A0A2K1WNK4 A0A2K1WNK4 A0A2K1WNK2 A0A2K1WNK2 A0A2K1WNJ7 A0A2K1WNJ7 A0A2K1WMK2 A0A2K1WMK2 A0A2K2APS7 A0A2K2APS7 A0A2K2AQT7 A0A2K2AQT7 A0A2K2ARD9 A0A2K2ARD9 A0A2K2B1P0 A0A2K2B1P0 A0A2K2B7B8 A0A2K2B7B8 A0A2K2B860 A0A2K2B860 A0A2K2BCJ3 A0A2K2BCJ3 A0A2K2BRT4 A0A2K2BRT4 A0A2K2BTE6 A0A2K2BTE6 A0A2K2BUJ1 A0A2K2BUJ1 A0A2K2BV36 A0A2K2BV36 A0A2K2BVF1 A0A2K2BVF1 A0A2K2BX58 A0A2K2BX58 A0A2K2BZJ6 A0A2K2BZJ6 A0A2K2C061 A0A2K2C061 A0A2K2C6V2 A0A2K2C6V2 A0A2K2C6W6 A0A2K2C6W6 A0A3N7EMN3 A0A3N7EMN3 A0A3N7EU72 A0A3N7EU72 A0A3N7EUX6 A0A3N7EUX6 A0A3N7F1A4 A0A3N7F1A4 A0A3N7F1R1 A0A3N7F1R1 A0A3N7F2M7 A0A3N7F2M7 A0A3N7F5R5 A0A3N7F5R5 A0A3N7FS84 A0A3N7FS84 A0A3N7FWP1 A0A3N7FWP1 A0A3N7FWP3 A0A3N7FWP3 A0A3N7FYQ7 A0A3N7FYQ7 A0A3N7FZF8 A0A3N7FZF8 A0A3N7G1E5 A0A3N7G1E5 A0A2K2AEB3 A0A2K2AEB3 A0A2K2ACN0 A0A2K2ACN0 A0A2K2AAR5 A0A2K2AAR5 A0A2K2A8P8 A0A2K2A8P8 U5G0W4_POPTR U5G0W4_POPTR U5GCX0_POPTR U5GCX0_POPTR U5FVM2_POPTR U5FVM2_POPTR U5FSJ3_POPTR U5FSJ3_POPTR U5FMG8_POPTR U5FMG8_POPTR U5FJY3_POPTR U5FJY3_POPTR B9NBP0_POPTR B9NBP0_POPTR B9N913_POPTR B9N913_POPTR B9N7M5_POPTR B9N7M5_POPTR B9N7D1_POPTR B9N7D1_POPTR B9N3L1_POPTR B9N3L1_POPTR B9N0T3_POPTR B9N0T3_POPTR B9IHS9_POPTR B9IHS9_POPTR B9IHM3_POPTR B9IHM3_POPTR B9ID35_POPTR B9ID35_POPTR B9I6M8_POPTR B9I6M8_POPTR B9I4Z8_POPTR B9I4Z8_POPTR B9I2V4_POPTR B9I2V4_POPTR B9HV77_POPTR B9HV77_POPTR B9HUZ8_POPTR B9HUZ8_POPTR B9HUU3_POPTR B9HUU3_POPTR B9HUM8_POPTR B9HUM8_POPTR B9HR23_POPTR B9HR23_POPTR B9HPC0_POPTR B9HPC0_POPTR B9HP11_POPTR B9HP11_POPTR B9HK06_POPTR B9HK06_POPTR B9HJ94_POPTR B9HJ94_POPTR B9HIQ4_POPTR B9HIQ4_POPTR B9HGW0_POPTR B9HGW0_POPTR B9HB53_POPTR B9HB53_POPTR B9HAS9_POPTR B9HAS9_POPTR B9H8R3_POPTR B9H8R3_POPTR B9H7D6_POPTR B9H7D6_POPTR B9H5K4_POPTR B9H5K4_POPTR B9H361_POPTR B9H361_POPTR B9H2X0_POPTR B9H2X0_POPTR B9H2W7_POPTR B9H2W7_POPTR B9H271_POPTR B9H271_POPTR B9H268_POPTR B9H268_POPTR B9H0X9_POPTR B9H0X9_POPTR B9H0B0_POPTR B9H0B0_POPTR B9GZS4_POPTR B9GZS4_POPTR A0A3N7G2I3 A0A3N7G2I3 A0A3N7G7Y6 A0A3N7G7Y6 A0A3N7GC26 A0A3N7GC26 A0A3N7GCD5 A0A3N7GCD5 A0A3N7GD99 A0A3N7GD99 A0A3N7GFA5 A0A3N7GFA5 A0A3N7H5K2 A0A3N7H5K2 A0A3N7H5W9 A0A3N7H5W9 A0A3N7HMX9 A0A3N7HMX9 A0A3N7HTA3 A0A3N7HTA3 rpoC2 rpoC2 rpoC1 rpoC1 rpoB rpoB A9P7Y3_POPTR A9P7Y3_POPTR A9PCB4_POPTR A9PCB4_POPTR A9PCX0_POPTR A9PCX0_POPTR A9PF10_POPTR A9PF10_POPTR A9PGH2_POPTR A9PGH2_POPTR A9PGQ8_POPTR A9PGQ8_POPTR A9PIB0_POPTR A9PIB0_POPTR B9GF89_POPTR B9GF89_POPTR B9GGT8_POPTR B9GGT8_POPTR B9GGV6_POPTR B9GGV6_POPTR B9GK51_POPTR B9GK51_POPTR B9GM22_POPTR B9GM22_POPTR B9GRK4_POPTR B9GRK4_POPTR B9GSP7_POPTR B9GSP7_POPTR B9GX40_POPTR B9GX40_POPTR B9GZK2_POPTR B9GZK2_POPTR A0A2K2A532 A0A2K2A532 A0A2K2A2B9 A0A2K2A2B9 A0A2K2A1T1 A0A2K2A1T1 A0A2K2A087 A0A2K2A087 A0A2K1ZW32 A0A2K1ZW32 A0A2K1ZUX1 A0A2K1ZUX1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A2K1ZTC1SANTA domain-containing protein. (373 aa)
A0A2K1ZSL0BSD domain-containing protein. (603 aa)
A0A2K1ZI73SHS2_Rpb7-N domain-containing protein. (176 aa)
A0A2K1ZHM3Uncharacterized protein; Belongs to the cyclin family. (372 aa)
A0A2K1ZBJ8Uncharacterized protein. (87 aa)
A0A2K1ZAY4Uncharacterized protein. (1808 aa)
A0A2K1Z7B9Uncharacterized protein. (135 aa)
A0A2K1Z5I7RPOLD domain-containing protein. (311 aa)
A0A2K1YYB3TFIIF_beta domain-containing protein. (285 aa)
A0A2K1YSH6EAF domain-containing protein. (317 aa)
A0A2K1YFR6Uncharacterized protein. (751 aa)
A0A2K1YFN8Plus3 domain-containing protein. (666 aa)
A0A2K1YD70Uncharacterized protein. (143 aa)
A0A2K1Y8B0DUF4101 domain-containing protein. (839 aa)
A0A2K1Y5L9RNA_pol_Rpb1_1 domain-containing protein. (239 aa)
A0A2K1XYT2Uncharacterized protein. (1111 aa)
A0A2K1XFA9Uncharacterized protein. (350 aa)
A0A2K1XE81Uncharacterized protein. (765 aa)
A0A2K1X9V4Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1692 aa)
A0A2K1X961Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (538 aa)
A0A2K1X2Q6SANTA domain-containing protein. (308 aa)
A0A2K1WZ81RNA polymerase II C-terminal domain phosphatase-like; This promotes the activity of RNA polymerase II. (472 aa)
A0A2K1WZ72BRCT domain-containing protein. (66 aa)
A0A2K1WZ64Uncharacterized protein. (213 aa)
A0A2K1WYV8MAT1 domain-containing protein. (186 aa)
A0A2K1WUG2Uncharacterized protein. (139 aa)
A0A2K1WUE8DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1192 aa)
A0A2K1WNL2RNA_pol_Rpb1_1 domain-containing protein. (145 aa)
A0A2K1WNK4DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (312 aa)
A0A2K1WNK2Uncharacterized protein. (471 aa)
A0A2K1WNJ7Uncharacterized protein. (90 aa)
A0A2K1WMK2TFIIS N-terminal domain-containing protein. (362 aa)
A0A2K2APS7DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1198 aa)
A0A2K2AQT7Uncharacterized protein. (89 aa)
A0A2K2ARD9SANTA domain-containing protein. (528 aa)
A0A2K2B1P0Uncharacterized protein. (665 aa)
A0A2K2B7B8Uncharacterized protein; Belongs to the cyclin family. (594 aa)
A0A2K2B860Uncharacterized protein. (1276 aa)
A0A2K2BCJ3Uncharacterized protein. (269 aa)
A0A2K2BRT4Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1626 aa)
A0A2K2BTE6Uncharacterized protein. (1262 aa)
A0A2K2BUJ1RNA_pol_Rpb1_2 domain-containing protein. (124 aa)
A0A2K2BV36Uncharacterized protein. (691 aa)
A0A2K2BVF1Uncharacterized protein. (769 aa)
A0A2K2BX58TFIIS N-terminal domain-containing protein. (513 aa)
A0A2K2BZJ6Uncharacterized protein. (104 aa)
A0A2K2C061Uncharacterized protein. (676 aa)
A0A2K2C6V2Uncharacterized protein. (552 aa)
A0A2K2C6W6Uncharacterized protein. (563 aa)
A0A3N7EMN3RNA_pol_Rpb1_5 domain-containing protein. (260 aa)
A0A3N7EU72Uncharacterized protein. (230 aa)
A0A3N7EUX6RNA_pol_Rpb5_N domain-containing protein. (112 aa)
A0A3N7F1A4Uncharacterized protein. (218 aa)
A0A3N7F1R1FACT-Spt16_Nlob domain-containing protein. (591 aa)
A0A3N7F2M7Uncharacterized protein. (368 aa)
A0A3N7F5R5Uncharacterized protein. (175 aa)
A0A3N7FS84Uncharacterized protein. (51 aa)
A0A3N7FWP1RPOLA_N domain-containing protein. (172 aa)
A0A3N7FWP3RNA_pol_Rpb1_5 domain-containing protein. (256 aa)
A0A3N7FYQ7Uncharacterized protein. (99 aa)
A0A3N7FZF8Uncharacterized protein. (543 aa)
A0A3N7G1E5TFIIS N-terminal domain-containing protein. (349 aa)
A0A2K2AEB3Uncharacterized protein; Belongs to the cyclin family. (625 aa)
A0A2K2ACN0Protein kinase domain-containing protein. (714 aa)
A0A2K2AAR5CYCLIN domain-containing protein; Belongs to the cyclin family. (332 aa)
A0A2K2A8P8Uncharacterized protein. (260 aa)
U5G0W4_POPTRUncharacterized protein. (990 aa)
U5GCX0_POPTRUncharacterized protein. (1065 aa)
U5FVM2_POPTRUncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family. (148 aa)
U5FSJ3_POPTRUncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family. (138 aa)
U5FMG8_POPTRNuclear cap-binding protein subunit 2. (255 aa)
U5FJY3_POPTRUncharacterized protein. (333 aa)
B9NBP0_POPTRCDC73_C domain-containing protein. (256 aa)
B9N913_POPTRUncharacterized protein. (54 aa)
B9N7M5_POPTRGeneral transcription factor IIH subunit. (412 aa)
B9N7D1_POPTRUncharacterized protein. (206 aa)
B9N3L1_POPTRUncharacterized protein. (70 aa)
B9N0T3_POPTRUncharacterized protein. (537 aa)
B9IHS9_POPTRUncharacterized protein. (243 aa)
B9IHM3_POPTRUncharacterized protein. (333 aa)
B9ID35_POPTRUncharacterized protein. (143 aa)
B9I6M8_POPTRUncharacterized protein. (1082 aa)
B9I4Z8_POPTRUncharacterized protein. (247 aa)
B9I2V4_POPTRUncharacterized protein. (620 aa)
B9HV77_POPTRUncharacterized protein; Belongs to the cyclin family. (375 aa)
B9HUZ8_POPTRTranscription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family. (116 aa)
B9HUU3_POPTRUncharacterized protein. (405 aa)
B9HUM8_POPTRSHS2_Rpb7-N domain-containing protein. (189 aa)
B9HR23_POPTRUncharacterized protein. (70 aa)
B9HPC0_POPTRSkp1_POZ domain-containing protein; Belongs to the SKP1 family. (98 aa)
B9HP11_POPTRMIF4G domain-containing protein. (868 aa)
B9HK06_POPTRTranscription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family. (116 aa)
B9HJ94_POPTREAF domain-containing protein. (308 aa)
B9HIQ4_POPTRDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (114 aa)
B9HGW0_POPTRUncharacterized protein; Belongs to the cyclin family. (625 aa)
B9HB53_POPTRMAT1 domain-containing protein. (185 aa)
B9HAS9_POPTRUncharacterized protein. (169 aa)
B9H8R3_POPTRUncharacterized protein. (412 aa)
B9H7D6_POPTRUncharacterized protein. (298 aa)
B9H5K4_POPTRRPOL4c domain-containing protein. (138 aa)
B9H361_POPTREAF domain-containing protein. (341 aa)
B9H2X0_POPTRUncharacterized protein. (91 aa)
B9H2W7_POPTRRNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (449 aa)
B9H271_POPTRUncharacterized protein. (996 aa)
B9H268_POPTRPlus3 domain-containing protein. (662 aa)
B9H0X9_POPTRTranscription elongation factor SPT5. (1051 aa)
B9H0B0_POPTRUncharacterized protein. (261 aa)
B9GZS4_POPTRUncharacterized protein. (642 aa)
A0A3N7G2I3DUF4101 domain-containing protein. (623 aa)
A0A3N7G7Y6Uncharacterized protein. (81 aa)
A0A3N7GC26Rtt106 domain-containing protein. (400 aa)
A0A3N7GCD5Uncharacterized protein. (210 aa)
A0A3N7GD99Uncharacterized protein. (206 aa)
A0A3N7GFA5TFIIS-type domain-containing protein. (93 aa)
A0A3N7H5K2Uncharacterized protein. (825 aa)
A0A3N7H5W9Uncharacterized protein. (913 aa)
A0A3N7HMX9Uncharacterized protein. (427 aa)
A0A3N7HTA3Uncharacterized protein. (590 aa)
rpoC2DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1390 aa)
rpoC1DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the RNA polymerase beta' chain family. RpoC1 subfamily. (689 aa)
rpoBDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1070 aa)
A9P7Y3_POPTRUncharacterized protein. (261 aa)
A9PCB4_POPTRRNA_pol_L_2 domain-containing protein. (116 aa)
A9PCX0_POPTRUbiquitin-like domain-containing protein. (103 aa)
A9PF10_POPTRUncharacterized protein. (71 aa)
A9PGH2_POPTRSHS2_Rpb7-N domain-containing protein. (176 aa)
A9PGQ8_POPTRUncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family. (143 aa)
A9PIB0_POPTRNuclear cap-binding protein subunit 2. (255 aa)
B9GF89_POPTRUncharacterized protein. (642 aa)
B9GGT8_POPTRTFIIS N-terminal domain-containing protein. (361 aa)
B9GGV6_POPTRUncharacterized protein. (176 aa)
B9GK51_POPTRUncharacterized protein; Belongs to the cyclin family. (592 aa)
B9GM22_POPTRUncharacterized protein. (233 aa)
B9GRK4_POPTRUncharacterized protein; Belongs to the cyclin family. (426 aa)
B9GSP7_POPTRHelicase ATP-binding domain-containing protein. (758 aa)
B9GX40_POPTRUncharacterized protein. (681 aa)
B9GZK2_POPTRTFIIS N-terminal domain-containing protein. (514 aa)
A0A2K2A532Uncharacterized protein. (74 aa)
A0A2K2A2B9TPR_REGION domain-containing protein. (1089 aa)
A0A2K2A1T1Uncharacterized protein. (113 aa)
A0A2K2A087Uncharacterized protein. (352 aa)
A0A2K1ZW32Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1644 aa)
A0A2K1ZUX1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (539 aa)
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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