30 items (Populus trichocarpa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2K1XXH8	Uncharacterized protein. (453 aa)
	A0A2K1YL85	Uncharacterized protein. (563 aa)
	A0A2K1YLT4	4HBT domain-containing protein. (134 aa)
	A0A2K1Z4H4	PKS_AT domain-containing protein. (393 aa)
	A0A2K2BVX1	MINDY_DUB domain-containing protein. (721 aa)
	A0A2K2C527	PKS_AT domain-containing protein. (317 aa)
	A0A2K2C7D0	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (343 aa)
	A0A2K2CB23	Uncharacterized protein. (295 aa)
	A0A3N7EZR3	4HBT domain-containing protein. (156 aa)
	A0A3N7FKZ3	Uncharacterized protein. (832 aa)
	A0A3N7FN89	MINDY_DUB domain-containing protein. (722 aa)
	A0A3N7FSH9	AMP-binding domain-containing protein. (122 aa)
	A9PCW5_POPTR	4HBT domain-containing protein. (156 aa)
	B9GKV5_POPTR	Elf4 domain-containing protein. (114 aa)
	B9GNI1_POPTR	Uncharacterized protein. (444 aa)
	B9GPW9_POPTR	4HBT domain-containing protein. (174 aa)
	B9GW27_POPTR	Elf4 domain-containing protein. (114 aa)
	B9GXC2_POPTR	4HBT domain-containing protein. (151 aa)
	B9HIM9_POPTR	Uncharacterized protein. (265 aa)
	B9HP78_POPTR	4HBT domain-containing protein. (158 aa)
	B9HX29_POPTR	Uncharacterized protein. (264 aa)
	POPTR_T030600	Uncharacterized protein. (823 aa)
	B9IC93_POPTR	4HBT domain-containing protein. (171 aa)
	B9IJ37_POPTR	Uncharacterized protein. (554 aa)
	B9INK1_POPTR	Elf4 domain-containing protein. (158 aa)
	B9MSX7_POPTR	Elf4 domain-containing protein. (114 aa)
	B9MTQ4_POPTR	BZIP domain-containing protein. (485 aa)
	B9N6L8_POPTR	PKS_ER domain-containing protein. (368 aa)
	U5FX66_POPTR	4HBT domain-containing protein. (166 aa)
	U5GUK7_POPTR	Uncharacterized protein. (67 aa)

Your Current Organism:

Populus trichocarpa

NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2K1XXH8	A0A2K2C7D0	A0A2K1XXH8	A0A2K2C7D0	Uncharacterized protein.	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	0.571
A0A2K1XXH8	A0A2K2CB23	A0A2K1XXH8	A0A2K2CB23	Uncharacterized protein.	Uncharacterized protein.	0.649
A0A2K1XXH8	B9GKV5_POPTR	A0A2K1XXH8	B9GKV5	Uncharacterized protein.	Elf4 domain-containing protein.	0.649
A0A2K1XXH8	B9GW27_POPTR	A0A2K1XXH8	B9GW27	Uncharacterized protein.	Elf4 domain-containing protein.	0.649
A0A2K1XXH8	B9HIM9_POPTR	A0A2K1XXH8	B9HIM9	Uncharacterized protein.	Uncharacterized protein.	0.571
A0A2K1XXH8	B9HX29_POPTR	A0A2K1XXH8	B9HX29	Uncharacterized protein.	Uncharacterized protein.	0.571
A0A2K1XXH8	B9INK1_POPTR	A0A2K1XXH8	B9INK1	Uncharacterized protein.	Elf4 domain-containing protein.	0.649
A0A2K1XXH8	B9MSX7_POPTR	A0A2K1XXH8	B9MSX7	Uncharacterized protein.	Elf4 domain-containing protein.	0.649
A0A2K1YL85	A0A2K1YLT4	A0A2K1YL85	A0A2K1YLT4	Uncharacterized protein.	4HBT domain-containing protein.	0.409
A0A2K1YL85	A0A2K2C7D0	A0A2K1YL85	A0A2K2C7D0	Uncharacterized protein.	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	0.967
A0A2K1YL85	A0A2K2CB23	A0A2K1YL85	A0A2K2CB23	Uncharacterized protein.	Uncharacterized protein.	0.649
A0A2K1YL85	A0A3N7FKZ3	A0A2K1YL85	A0A3N7FKZ3	Uncharacterized protein.	Uncharacterized protein.	0.418
A0A2K1YL85	B9GKV5_POPTR	A0A2K1YL85	B9GKV5	Uncharacterized protein.	Elf4 domain-containing protein.	0.574
A0A2K1YL85	B9GW27_POPTR	A0A2K1YL85	B9GW27	Uncharacterized protein.	Elf4 domain-containing protein.	0.574
A0A2K1YL85	B9HIM9_POPTR	A0A2K1YL85	B9HIM9	Uncharacterized protein.	Uncharacterized protein.	0.592
A0A2K1YL85	B9HX29_POPTR	A0A2K1YL85	B9HX29	Uncharacterized protein.	Uncharacterized protein.	0.592
A0A2K1YL85	B9INK1_POPTR	A0A2K1YL85	B9INK1	Uncharacterized protein.	Elf4 domain-containing protein.	0.574
A0A2K1YL85	B9MSX7_POPTR	A0A2K1YL85	B9MSX7	Uncharacterized protein.	Elf4 domain-containing protein.	0.574
A0A2K1YL85	POPTR_T030600	A0A2K1YL85	B9HXR1	Uncharacterized protein.	Uncharacterized protein.	0.418
A0A2K1YL85	U5FX66_POPTR	A0A2K1YL85	U5FX66	Uncharacterized protein.	4HBT domain-containing protein.	0.409

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