50 items (Populus trichocarpa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	U5GKP7_POPTR	Histone H2B; Belongs to the histone H2B family. (147 aa)
	U5GCI2_POPTR	Histone H2B; Belongs to the histone H2B family. (148 aa)
	U5G1M0_POPTR	Histone H2B; Belongs to the histone H2B family. (145 aa)
	U5FMJ8_POPTR	Ubiquitin-like domain-containing protein. (156 aa)
	U5FKY2_POPTR	Ubiquitin-like domain-containing protein. (123 aa)
	U5FI64_POPTR	Uncharacterized protein. (1680 aa)
	B9NBP0_POPTR	CDC73_C domain-containing protein. (256 aa)
	B9I2V4_POPTR	Uncharacterized protein. (620 aa)
	B9HUV8_POPTR	Histone H2B; Belongs to the histone H2B family. (140 aa)
	B9HUU3_POPTR	Uncharacterized protein. (405 aa)
	B9HDT8_POPTR	Uncharacterized protein. (457 aa)
	B9HD18_POPTR	RING-type domain-containing protein. (404 aa)
	B9H268_POPTR	Plus3 domain-containing protein. (662 aa)
	A9PDD5_POPTR	Histone H2B; Belongs to the histone H2B family. (143 aa)
	A9PC90_POPTR	Histone H2B; Belongs to the histone H2B family. (139 aa)
	A9PBB0_POPTR	Protein YIPF. (250 aa)
	A9P8Q5_POPTR	Histone H2B; Belongs to the histone H2B family. (139 aa)
	A9P8M2_POPTR	Ubiquitin-like domain-containing protein. (156 aa)
	A9P863_POPTR	Ubiquitin-like domain-containing protein. (156 aa)
	A0A3N7GHC3	Histone H2B; Belongs to the histone H2B family. (230 aa)
	A0A3N7G878	E3 ubiquitin protein ligase. (125 aa)
	A0A3N7FII9	Histone H2B; Belongs to the histone H2B family. (148 aa)
	A0A3N7ELV5	Ubiquitin-like domain-containing protein. (202 aa)
	A0A2K2C5G1	Uncharacterized protein. (1022 aa)
	A0A2K2C1A8	Histone domain-containing protein; Belongs to the histone H2B family. (163 aa)
	A0A2K2C061	Uncharacterized protein. (676 aa)
	A0A2K2BQH7	E3 ubiquitin protein ligase. (881 aa)
	A0A2K2BIN5	E3 ubiquitin protein ligase. (879 aa)
	A0A2K2B1P0	Uncharacterized protein. (665 aa)
	A0A2K2AWY2	Protein YIPF. (250 aa)
	A0A2K2AS36	Histone H2B; Belongs to the histone H2B family. (149 aa)
	A0A2K2AHB9	Uncharacterized protein. (59 aa)
	A0A2K2A2B9	TPR_REGION domain-containing protein. (1089 aa)
	A0A2K1ZWQ0	Ubiquitin-like domain-containing protein. (147 aa)
	A0A2K1Z509	Uncharacterized protein. (1051 aa)
	A0A2K1YFN8	Plus3 domain-containing protein. (666 aa)
	A0A2K1YC75	Ubiquitin-like domain-containing protein. (203 aa)
	A0A2K1Y126	Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family. (356 aa)
	A0A2K1XQY7	E3 ubiquitin protein ligase. (879 aa)
	A0A2K1XNQ6	Uncharacterized protein. (1019 aa)
	A0A2K1X9V8	Uncharacterized protein. (112 aa)
	A0A2K1WQH7	Uncharacterized protein. (171 aa)
	A0A2K1WQF6	Uncharacterized protein. (270 aa)
	A0A2K1WQF5	Uncharacterized protein. (48 aa)
	A0A2K1WQE0	RING-type domain-containing protein. (292 aa)
	A0A2K1WQD9	Helicase C-terminal domain-containing protein. (273 aa)
	A0A2K1WQD4	Uncharacterized protein. (238 aa)
	A0A2K1WN79	Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family. (388 aa)
	POPTR_T042000	Helicase C-terminal domain-containing protein. (234 aa)
	POPTR_T042300	Helicase C-terminal domain-containing protein. (218 aa)

Your Current Organism:

Populus trichocarpa

NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2K1WN79	A0A2K1Y126	A0A2K1WN79	A0A2K1Y126	Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	0.543
A0A2K1WN79	A0A2K1YC75	A0A2K1WN79	A0A2K1YC75	Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	Ubiquitin-like domain-containing protein.	0.573
A0A2K1WN79	A0A2K1ZWQ0	A0A2K1WN79	A0A2K1ZWQ0	Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	Ubiquitin-like domain-containing protein.	0.573
A0A2K1WN79	A0A3N7ELV5	A0A2K1WN79	A0A3N7ELV5	Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	Ubiquitin-like domain-containing protein.	0.573
A0A2K1WN79	A9P863_POPTR	A0A2K1WN79	A9P863	Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	Ubiquitin-like domain-containing protein.	0.573
A0A2K1WN79	A9P8M2_POPTR	A0A2K1WN79	A9P8M2	Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	Ubiquitin-like domain-containing protein.	0.573
A0A2K1WN79	B9HD18_POPTR	A0A2K1WN79	B9HD18	Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	RING-type domain-containing protein.	0.983
A0A2K1WN79	U5FKY2_POPTR	A0A2K1WN79	U5FKY2	Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	Ubiquitin-like domain-containing protein.	0.573
A0A2K1WN79	U5FMJ8_POPTR	A0A2K1WN79	U5FMJ8	Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	Ubiquitin-like domain-containing protein.	0.573
A0A2K1WQD4	A0A2K1YC75	A0A2K1WQD4	A0A2K1YC75	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.418
A0A2K1WQD4	A0A2K1ZWQ0	A0A2K1WQD4	A0A2K1ZWQ0	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.418
A0A2K1WQD4	A0A3N7ELV5	A0A2K1WQD4	A0A3N7ELV5	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.418
A0A2K1WQD4	A9P863_POPTR	A0A2K1WQD4	A9P863	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.418
A0A2K1WQD4	A9P8M2_POPTR	A0A2K1WQD4	A9P8M2	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.418
A0A2K1WQD4	U5FKY2_POPTR	A0A2K1WQD4	U5FKY2	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.418
A0A2K1WQD4	U5FMJ8_POPTR	A0A2K1WQD4	U5FMJ8	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.418
A0A2K1WQD9	A0A2K1YC75	A0A2K1WQD9	A0A2K1YC75	Helicase C-terminal domain-containing protein.	Ubiquitin-like domain-containing protein.	0.418
A0A2K1WQD9	A0A2K1ZWQ0	A0A2K1WQD9	A0A2K1ZWQ0	Helicase C-terminal domain-containing protein.	Ubiquitin-like domain-containing protein.	0.418
A0A2K1WQD9	A0A3N7ELV5	A0A2K1WQD9	A0A3N7ELV5	Helicase C-terminal domain-containing protein.	Ubiquitin-like domain-containing protein.	0.418
A0A2K1WQD9	A9P863_POPTR	A0A2K1WQD9	A9P863	Helicase C-terminal domain-containing protein.	Ubiquitin-like domain-containing protein.	0.418

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