38 items (Populus trichocarpa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	POPTR_T137100	PPM-type phosphatase domain-containing protein. (357 aa)
	B9ICY7_POPTR	Uncharacterized protein; Belongs to the DEAD box helicase family. (680 aa)
	B9IBY0_POPTR	Uncharacterized protein; Belongs to the arginase family. (333 aa)
	B9I570_POPTR	PPM-type phosphatase domain-containing protein. (370 aa)
	B9HFN6_POPTR	Inos-1-P_synth domain-containing protein. (510 aa)
	B9HDZ0_POPTR	Uncharacterized protein. (493 aa)
	B9HDB4_POPTR	PPM-type phosphatase domain-containing protein. (548 aa)
	B9HAK7_POPTR	Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. (321 aa)
	JMT1	S-adenosyl-L-methionine:jasmonic acid carboxyl methyltransferase. (369 aa)
	SABATH2	S-adenosyl-L-methionine:carboxyl methyltransferase. (372 aa)
	U5FJG5_POPTR	Uncharacterized protein. (548 aa)
	U5FNX9_POPTR	Alpha-amylase. (422 aa)
	A0A2K1XMG9	PPM-type phosphatase domain-containing protein. (393 aa)
	A0A2K1YCX1	Uncharacterized protein. (687 aa)
	A0A2K1YD08	PPM-type phosphatase domain-containing protein. (389 aa)
	A0A2K1YRA8	Uncharacterized protein. (917 aa)
	A0A2K1YX62	PPM-type phosphatase domain-containing protein. (397 aa)
	A0A2K1Z2A7	PPM-type phosphatase domain-containing protein. (439 aa)
	A0A2K2AD85	Inos-1-P_synth domain-containing protein. (510 aa)
	A0A2K2B5E5	Uncharacterized protein. (495 aa)
	A0A2K2BHY1	Alpha-amylase; Belongs to the glycosyl hydrolase 13 family. (439 aa)
	A0A2K2BUV8	PPM-type phosphatase domain-containing protein. (388 aa)
	A0A3N7FZB1	PPM-type phosphatase domain-containing protein. (394 aa)
	ycf3	Photosystem I assembly protein Ycf3; Essential for the assembly of the photosystem I (PSI) complex. May act as a chaperone-like factor to guide the assembly of the PSI subunits; Belongs to the Ycf3 family. (168 aa)
	A9PB16_POPTR	Eukaryotic translation initiation factor 5A. (160 aa)
	A9PBD0_POPTR	Eukaryotic translation initiation factor 5A. (159 aa)
	A9PFK6_POPTR	PPM-type phosphatase domain-containing protein. (390 aa)
	A9PI18_POPTR	Eukaryotic translation initiation factor 5A. (160 aa)
	RAP2L7	RAP2.4-like protein. (155 aa)
	B9GPE6_POPTR	Uncharacterized protein; Belongs to the arginase family. (338 aa)
	B9GQ54_POPTR	Alpha-amylase; Belongs to the glycosyl hydrolase 13 family. (410 aa)
	B9GVD6_POPTR	PPM-type phosphatase domain-containing protein. (546 aa)
	A0A2K1XIL6	GP-PDE domain-containing protein. (399 aa)
	A0A2K1XGN5	PPM-type phosphatase domain-containing protein. (356 aa)
	A0A2K1X5J4	Uncharacterized protein. (966 aa)
	A0A2K1X089	Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. (323 aa)
	A0A2K1WWK4	PPM-type phosphatase domain-containing protein. (548 aa)
	POPTR_T063000	PPM-type phosphatase domain-containing protein. (388 aa)

Your Current Organism:

Populus trichocarpa

NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2K1WWK4	RAP2L7	A0A2K1WWK4	A9PL97	PPM-type phosphatase domain-containing protein.	RAP2.4-like protein.	0.447
A0A2K1WWK4	U5FJG5_POPTR	A0A2K1WWK4	U5FJG5	PPM-type phosphatase domain-containing protein.	Uncharacterized protein.	0.559
A0A2K1X089	A0A2K1XIL6	A0A2K1X089	A0A2K1XIL6	Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.	GP-PDE domain-containing protein.	0.710
A0A2K1X089	A0A2K1YCX1	A0A2K1X089	A0A2K1YCX1	Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.	Uncharacterized protein.	0.769
A0A2K1X089	B9ICY7_POPTR	A0A2K1X089	B9ICY7	Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.769
A0A2K1X089	RAP2L7	A0A2K1X089	A9PL97	Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.	RAP2.4-like protein.	0.590
A0A2K1X089	U5FJG5_POPTR	A0A2K1X089	U5FJG5	Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.	Uncharacterized protein.	0.453
A0A2K1XGN5	RAP2L7	A0A2K1XGN5	A9PL97	PPM-type phosphatase domain-containing protein.	RAP2.4-like protein.	0.447
A0A2K1XGN5	U5FJG5_POPTR	A0A2K1XGN5	U5FJG5	PPM-type phosphatase domain-containing protein.	Uncharacterized protein.	0.614
A0A2K1XIL6	A0A2K1X089	A0A2K1XIL6	A0A2K1X089	GP-PDE domain-containing protein.	Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.	0.710
A0A2K1XIL6	A0A2K1YCX1	A0A2K1XIL6	A0A2K1YCX1	GP-PDE domain-containing protein.	Uncharacterized protein.	0.823
A0A2K1XIL6	A0A2K2AD85	A0A2K1XIL6	A0A2K2AD85	GP-PDE domain-containing protein.	Inos-1-P_synth domain-containing protein.	0.516
A0A2K1XIL6	A0A2K2B5E5	A0A2K1XIL6	A0A2K2B5E5	GP-PDE domain-containing protein.	Uncharacterized protein.	0.685
A0A2K1XIL6	B9HAK7_POPTR	A0A2K1XIL6	B9HAK7	GP-PDE domain-containing protein.	Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.	0.710
A0A2K1XIL6	B9HDZ0_POPTR	A0A2K1XIL6	B9HDZ0	GP-PDE domain-containing protein.	Uncharacterized protein.	0.701
A0A2K1XIL6	B9HFN6_POPTR	A0A2K1XIL6	B9HFN6	GP-PDE domain-containing protein.	Inos-1-P_synth domain-containing protein.	0.516
A0A2K1XIL6	B9ICY7_POPTR	A0A2K1XIL6	B9ICY7	GP-PDE domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.823
A0A2K1XIL6	JMT1	A0A2K1XIL6	B9H4E1	GP-PDE domain-containing protein.	S-adenosyl-L-methionine:jasmonic acid carboxyl methyltransferase.	0.707
A0A2K1XIL6	RAP2L7	A0A2K1XIL6	A9PL97	GP-PDE domain-containing protein.	RAP2.4-like protein.	0.618
A0A2K1XIL6	SABATH2	A0A2K1XIL6	S5MCY9	GP-PDE domain-containing protein.	S-adenosyl-L-methionine:carboxyl methyltransferase.	0.705

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