39 items (Populus trichocarpa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	U5GTV8_POPTR	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (664 aa)
	POPTR_T137100	PPM-type phosphatase domain-containing protein. (357 aa)
	POPTR_T063000	PPM-type phosphatase domain-containing protein. (388 aa)
	A0A2K1WRX5	Uncharacterized protein. (711 aa)
	A0A2K1WWK4	PPM-type phosphatase domain-containing protein. (548 aa)
	A0A2K1XEF6	Uncharacterized protein. (437 aa)
	A0A2K1XGN5	PPM-type phosphatase domain-containing protein. (356 aa)
	A0A2K1XMG9	PPM-type phosphatase domain-containing protein. (393 aa)
	A0A2K1Y935	Uncharacterized protein. (632 aa)
	A0A2K1Y979	Uncharacterized protein. (632 aa)
	A0A2K1YD08	PPM-type phosphatase domain-containing protein. (389 aa)
	A0A2K1YX62	PPM-type phosphatase domain-containing protein. (397 aa)
	A0A2K1Z2A7	PPM-type phosphatase domain-containing protein. (439 aa)
	A0A2K1ZF68	Uncharacterized protein. (670 aa)
	A0A2K1ZFQ9	Uncharacterized protein. (258 aa)
	A0A2K2AD76	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (691 aa)
	A0A2K2B3E2	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (626 aa)
	A0A2K2BSB2	Epimerase domain-containing protein. (337 aa)
	A0A2K2BSB6	Epimerase domain-containing protein. (236 aa)
	A0A2K2BUV8	PPM-type phosphatase domain-containing protein. (388 aa)
	A0A3N7F3N5	Uncharacterized protein. (437 aa)
	A0A3N7FW50	Epimerase domain-containing protein. (268 aa)
	A0A3N7FZB1	PPM-type phosphatase domain-containing protein. (394 aa)
	A9PCM3_POPTR	Uncharacterized protein. (251 aa)
	A9PFK6_POPTR	PPM-type phosphatase domain-containing protein. (390 aa)
	B2Z6Q2_POPTR	Cinnamoyl CoA reductase. (338 aa)
	B9GMB5_POPTR	Epimerase domain-containing protein. (342 aa)
	B9GVD6_POPTR	PPM-type phosphatase domain-containing protein. (546 aa)
	MYB221	MYB transcription factor. (268 aa)
	B9HDB4_POPTR	PPM-type phosphatase domain-containing protein. (548 aa)
	B9HFM8_POPTR	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (689 aa)
	MYB20	MYB transcription factor. (333 aa)
	MYB156	MYB transcription factor. (271 aa)
	MYB167	MYB transcription factor. (243 aa)
	B9I570_POPTR	PPM-type phosphatase domain-containing protein. (370 aa)
	MYB21	MYB transcription factor. (332 aa)
	MYB2	MYB transcription factor. (333 aa)
	U5GPI6_POPTR	Epimerase domain-containing protein. (341 aa)
	U5GTL3_POPTR	Epimerase domain-containing protein. (337 aa)

Your Current Organism:

Populus trichocarpa

NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2K1WRX5	A0A2K1XEF6	A0A2K1WRX5	A0A2K1XEF6	Uncharacterized protein.	Uncharacterized protein.	0.905
A0A2K1WRX5	A0A2K1ZFQ9	A0A2K1WRX5	A0A2K1ZFQ9	Uncharacterized protein.	Uncharacterized protein.	0.608
A0A2K1WRX5	A0A2K2AD76	A0A2K1WRX5	A0A2K2AD76	Uncharacterized protein.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.915
A0A2K1WRX5	A0A2K2B3E2	A0A2K1WRX5	A0A2K2B3E2	Uncharacterized protein.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.972
A0A2K1WRX5	A0A3N7F3N5	A0A2K1WRX5	A0A3N7F3N5	Uncharacterized protein.	Uncharacterized protein.	0.905
A0A2K1WRX5	B9HFM8_POPTR	A0A2K1WRX5	B9HFM8	Uncharacterized protein.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.915
A0A2K1WRX5	U5GTV8_POPTR	A0A2K1WRX5	U5GTV8	Uncharacterized protein.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.972
A0A2K1XEF6	A0A2K1WRX5	A0A2K1XEF6	A0A2K1WRX5	Uncharacterized protein.	Uncharacterized protein.	0.905
A0A2K1XEF6	A0A2K1ZFQ9	A0A2K1XEF6	A0A2K1ZFQ9	Uncharacterized protein.	Uncharacterized protein.	0.638
A0A2K1XEF6	A0A2K2AD76	A0A2K1XEF6	A0A2K2AD76	Uncharacterized protein.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.917
A0A2K1XEF6	A0A2K2B3E2	A0A2K1XEF6	A0A2K2B3E2	Uncharacterized protein.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.930
A0A2K1XEF6	A0A3N7F3N5	A0A2K1XEF6	A0A3N7F3N5	Uncharacterized protein.	Uncharacterized protein.	0.900
A0A2K1XEF6	B9HFM8_POPTR	A0A2K1XEF6	B9HFM8	Uncharacterized protein.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.917
A0A2K1XEF6	U5GTV8_POPTR	A0A2K1XEF6	U5GTV8	Uncharacterized protein.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.930
A0A2K1Y935	A0A2K1Y979	A0A2K1Y935	A0A2K1Y979	Uncharacterized protein.	Uncharacterized protein.	0.900
A0A2K1Y935	A0A2K1ZF68	A0A2K1Y935	A0A2K1ZF68	Uncharacterized protein.	Uncharacterized protein.	0.901
A0A2K1Y935	MYB156	A0A2K1Y935	B9HR69	Uncharacterized protein.	MYB transcription factor.	0.436
A0A2K1Y935	MYB167	A0A2K1Y935	B9I4W4	Uncharacterized protein.	MYB transcription factor.	0.437
A0A2K1Y935	MYB2	A0A2K1Y935	S5YEC4	Uncharacterized protein.	MYB transcription factor.	0.435
A0A2K1Y935	MYB20	A0A2K1Y935	B9HNP3	Uncharacterized protein.	MYB transcription factor.	0.436

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