STRINGSTRING
B9GZT5_POPTR B9GZT5_POPTR B9H299_POPTR B9H299_POPTR B9H5U1_POPTR B9H5U1_POPTR B9H920_POPTR B9H920_POPTR B9HDB4_POPTR B9HDB4_POPTR POPTR_T107200 POPTR_T107200 B9HI47_POPTR B9HI47_POPTR B9HI53_POPTR B9HI53_POPTR B9HJ80_POPTR B9HJ80_POPTR CYN CYN B9HWA2_POPTR B9HWA2_POPTR B9HY29_POPTR B9HY29_POPTR B9HY30_POPTR B9HY30_POPTR B9HYB6_POPTR B9HYB6_POPTR B9I570_POPTR B9I570_POPTR EFTS-3 EFTS-3 B9IFP7_POPTR B9IFP7_POPTR B9IJS4_POPTR B9IJS4_POPTR B9IL28_POPTR B9IL28_POPTR B9MUA4_POPTR B9MUA4_POPTR B9MXB0_POPTR B9MXB0_POPTR B9MZ79_POPTR B9MZ79_POPTR B9N1W3_POPTR B9N1W3_POPTR B9N219_POPTR B9N219_POPTR B9N7I3_POPTR B9N7I3_POPTR B9N915_POPTR B9N915_POPTR U5FXE4_POPTR U5FXE4_POPTR U5FYE1_POPTR U5FYE1_POPTR U5FZX8_POPTR U5FZX8_POPTR U5G9M2_POPTR U5G9M2_POPTR U5GAV5_POPTR U5GAV5_POPTR U7E312_POPTR U7E312_POPTR A0A2K1YX62 A0A2K1YX62 A0A2K1YND4 A0A2K1YND4 A0A2K1YKT4 A0A2K1YKT4 POPTR_T147900 POPTR_T147900 A0A2K1YD08 A0A2K1YD08 A0A2K1XVM7 A0A2K1XVM7 A0A2K1XMG9 A0A2K1XMG9 A0A2K1XGN5 A0A2K1XGN5 A0A2K1WWK4 A0A2K1WWK4 A0A2K1WSL9 A0A2K1WSL9 A0A2K1WSL6 A0A2K1WSL6 A0A2K1WRR8 A0A2K1WRR8 POPTR_T017600 POPTR_T017600 POPTR_T017700 POPTR_T017700 POPTR_T063000 POPTR_T063000 POPTR_T107300 POPTR_T107300 POPTR_T137100 POPTR_T137100 A9PD80_POPTR A9PD80_POPTR A9PCS2_POPTR A9PCS2_POPTR A9PA11_POPTR A9PA11_POPTR A9PA00_POPTR A9PA00_POPTR A9P9T9_POPTR A9P9T9_POPTR A9P8G6_POPTR A9P8G6_POPTR A9P828_POPTR A9P828_POPTR A9P807_POPTR A9P807_POPTR petD petD petB petB psbE psbE psaA psaA psbA psbA A0A3N7HV82 A0A3N7HV82 A0A3N7HRI5 A0A3N7HRI5 EFTS-2 EFTS-2 A0A3N7G7Y2 A0A3N7G7Y2 EFTS EFTS A0A3N7FZB1 A0A3N7FZB1 A0A3N7FPR8 A0A3N7FPR8 A0A3N7EP63 A0A3N7EP63 A0A2K2BUV8 A0A2K2BUV8 A0A2K2APU3 A0A2K2APU3 A0A2K2AN88 A0A2K2AN88 A0A2K2ACA7 A0A2K2ACA7 A0A2K2A8I6 A0A2K2A8I6 A0A2K2A7I4 A0A2K2A7I4 A0A2K2A054 A0A2K2A054 A0A2K1ZJY8 A0A2K1ZJY8 A0A2K1ZFK2 A0A2K1ZFK2 A0A2K1ZEW5 A0A2K1ZEW5 A0A2K1Z2A7 A0A2K1Z2A7 A0A2K1Z1V4 A0A2K1Z1V4 B9GX55_POPTR B9GX55_POPTR B9GVD6_POPTR B9GVD6_POPTR B9GRI3_POPTR B9GRI3_POPTR B9GL99_POPTR B9GL99_POPTR B9GJB1_POPTR B9GJB1_POPTR B9GH28_POPTR B9GH28_POPTR A9PI59_POPTR A9PI59_POPTR A9PHH1_POPTR A9PHH1_POPTR A9PHA3_POPTR A9PHA3_POPTR POPTR_T107500 POPTR_T107500 A9PGM2_POPTR A9PGM2_POPTR A9PGI5_POPTR A9PGI5_POPTR A9PG17_POPTR A9PG17_POPTR A9PFK6_POPTR A9PFK6_POPTR A9PE34_POPTR A9PE34_POPTR A9PDI7_POPTR A9PDI7_POPTR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
B9GZT5_POPTRPhosphoribulokinase. (405 aa)
B9H299_POPTRUncharacterized protein. (378 aa)
B9H5U1_POPTRGlyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (452 aa)
B9H920_POPTRAspartate aminotransferase. (449 aa)
B9HDB4_POPTRPPM-type phosphatase domain-containing protein. (548 aa)
POPTR_T107200Uncharacterized protein. (379 aa)
B9HI47_POPTRGlyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (422 aa)
B9HI53_POPTRPhosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (481 aa)
B9HJ80_POPTRATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. (559 aa)
CYNCyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family. (162 aa)
B9HWA2_POPTRATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. (558 aa)
B9HY29_POPTRPhosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (481 aa)
B9HY30_POPTRPhosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (401 aa)
B9HYB6_POPTRSuccinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (536 aa)
B9I570_POPTRPPM-type phosphatase domain-containing protein. (370 aa)
EFTS-3Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. (391 aa)
B9IFP7_POPTRPhosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (688 aa)
B9IJS4_POPTRThioredoxin; Belongs to the thioredoxin family. (140 aa)
B9IL28_POPTRAspartate aminotransferase. (466 aa)
B9MUA4_POPTRPhosphoribulokinase. (405 aa)
B9MXB0_POPTRAconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. (899 aa)
B9MZ79_POPTRUncharacterized protein. (380 aa)
B9N1W3_POPTR6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. (488 aa)
B9N219_POPTR14_3_3 domain-containing protein; Belongs to the 14-3-3 family. (262 aa)
B9N7I3_POPTRProteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (237 aa)
B9N915_POPTRAconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. (899 aa)
U5FXE4_POPTRAconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. (995 aa)
U5FYE1_POPTRKetol-acid reductoisomerase; Belongs to the ketol-acid reductoisomerase family. (588 aa)
U5FZX8_POPTRUncharacterized protein. (428 aa)
U5G9M2_POPTRUncharacterized protein. (298 aa)
U5GAV5_POPTRUncharacterized protein. (391 aa)
U7E312_POPTRAminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family. (408 aa)
A0A2K1YX62PPM-type phosphatase domain-containing protein. (397 aa)
A0A2K1YND4Uncharacterized protein; Belongs to the peptidase M16 family. (506 aa)
A0A2K1YKT4Uncharacterized protein. (428 aa)
POPTR_T14790014_3_3 domain-containing protein; Belongs to the 14-3-3 family. (279 aa)
A0A2K1YD08PPM-type phosphatase domain-containing protein. (389 aa)
A0A2K1XVM7Aspartate aminotransferase. (428 aa)
A0A2K1XMG9PPM-type phosphatase domain-containing protein. (393 aa)
A0A2K1XGN5PPM-type phosphatase domain-containing protein. (356 aa)
A0A2K1WWK4PPM-type phosphatase domain-containing protein. (548 aa)
A0A2K1WSL9Thioredoxin; Belongs to the thioredoxin family. (115 aa)
A0A2K1WSL6Thioredoxin; Belongs to the thioredoxin family. (111 aa)
A0A2K1WRR8KARI N-terminal Rossmann domain-containing protein. (245 aa)
POPTR_T0176006-phosphogluconate dehydrogenase, decarboxylating; Belongs to the 6-phosphogluconate dehydrogenase family. (530 aa)
POPTR_T0177006-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. (488 aa)
POPTR_T063000PPM-type phosphatase domain-containing protein. (388 aa)
POPTR_T107300Uncharacterized protein. (380 aa)
POPTR_T137100PPM-type phosphatase domain-containing protein. (357 aa)
A9PD80_POPTRzf-Tim10_DDP domain-containing protein. (95 aa)
A9PCS2_POPTREukaryotic translation initiation factor 3 subunit F; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (287 aa)
A9PA11_POPTRThioredoxin; Belongs to the thioredoxin family. (139 aa)
A9PA00_POPTRGlyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (338 aa)
A9P9T9_POPTR14_3_3 domain-containing protein; Belongs to the 14-3-3 family. (261 aa)
A9P8G6_POPTRThioredoxin; Belongs to the thioredoxin family. (122 aa)
A9P828_POPTRPhosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (401 aa)
A9P807_POPTRGlyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (341 aa)
petDCytochrome b6-f complex subunit 4; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (165 aa)
petBCytochrome b6; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (215 aa)
psbECytochrome b559 subunit alpha; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. Belongs to the PsbE/PsbF family. (83 aa)
psaAPhotosystem I P700 chlorophyll a apoprotein A1; PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin. (750 aa)
psbAPhotosystem II protein D1; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. (353 aa)
A0A3N7HV82Cytochrome c domain-containing protein. (209 aa)
A0A3N7HRI5Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. (999 aa)
EFTS-2Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. (351 aa)
A0A3N7G7Y2Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (342 aa)
EFTSElongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. (711 aa)
A0A3N7FZB1PPM-type phosphatase domain-containing protein. (394 aa)
A0A3N7FPR8Uncharacterized protein. (392 aa)
A0A3N7EP63Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (390 aa)
A0A2K2BUV8PPM-type phosphatase domain-containing protein. (388 aa)
A0A2K2APU3Ketol-acid reductoisomerase; Belongs to the ketol-acid reductoisomerase family. (589 aa)
A0A2K2AN88Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family. (408 aa)
A0A2K2ACA7Uncharacterized protein. (380 aa)
A0A2K2A8I6Aspartate aminotransferase. (466 aa)
A0A2K2A7I4Aspartate aminotransferase. (421 aa)
A0A2K2A054Aspartate aminotransferase. (422 aa)
A0A2K1ZJY8Uncharacterized protein; Belongs to the peptidase M16 family. (507 aa)
A0A2K1ZFK26-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. (485 aa)
A0A2K1ZEW5Dihydrolipoyl dehydrogenase. (511 aa)
A0A2K1Z2A7PPM-type phosphatase domain-containing protein. (439 aa)
A0A2K1Z1V4Uncharacterized protein. (247 aa)
B9GX55_POPTR6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. (492 aa)
B9GVD6_POPTRPPM-type phosphatase domain-containing protein. (546 aa)
B9GRI3_POPTRThioredoxin; Belongs to the thioredoxin family. (116 aa)
B9GL99_POPTR6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. (494 aa)
B9GJB1_POPTRGlyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (337 aa)
B9GH28_POPTRUncharacterized protein; Belongs to the peptidase M16 family. (507 aa)
A9PI59_POPTRGlyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (404 aa)
A9PHH1_POPTRAspartate aminotransferase. (407 aa)
A9PHA3_POPTRGlyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (422 aa)
POPTR_T107500Uncharacterized protein. (380 aa)
A9PGM2_POPTRThioredoxin; Belongs to the thioredoxin family. (139 aa)
A9PGI5_POPTRUncharacterized protein. (249 aa)
A9PG17_POPTRUncharacterized protein. (380 aa)
A9PFK6_POPTRPPM-type phosphatase domain-containing protein. (390 aa)
A9PE34_POPTRProteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (237 aa)
A9PDI7_POPTRThioredoxin; Belongs to the thioredoxin family. (114 aa)
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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