STRINGSTRING
B9IGD0_POPTR B9IGD0_POPTR POPTR_T059000 POPTR_T059000 A0A2K1X7Y4 A0A2K1X7Y4 A0A2K1X945 A0A2K1X945 A0A2K1XE00 A0A2K1XE00 A0A2K1YGB9 A0A2K1YGB9 A0A2K1Z2F7 A0A2K1Z2F7 A0A2K1ZEW5 A0A2K1ZEW5 A0A2K1ZUZ2 A0A2K1ZUZ2 A0A2K2A0W4 A0A2K2A0W4 A0A2K2AQA0 A0A2K2AQA0 A0A2K2ARA3 A0A2K2ARA3 A0A2K2BFD4 A0A2K2BFD4 A0A2K2CBT0 A0A2K2CBT0 A0A3N7FUP1 A0A3N7FUP1 A0A3N7G994 A0A3N7G994 A4ZSZ4_POPTR A4ZSZ4_POPTR COMT1 COMT1 A9P8T1_POPTR A9P8T1_POPTR A9P8T6_POPTR A9P8T6_POPTR A9P937_POPTR A9P937_POPTR A9PA21_POPTR A9PA21_POPTR A9PA83_POPTR A9PA83_POPTR A9PB21_POPTR A9PB21_POPTR A9PD83_POPTR A9PD83_POPTR A9PI76_POPTR A9PI76_POPTR B2Z6Q7_POPTR B2Z6Q7_POPTR B9GF13_POPTR B9GF13_POPTR B9GHS2_POPTR B9GHS2_POPTR B9GIW2_POPTR B9GIW2_POPTR B9GJ54_POPTR B9GJ54_POPTR B9GNC8_POPTR B9GNC8_POPTR B9GQ43_POPTR B9GQ43_POPTR B9GRR9_POPTR B9GRR9_POPTR B9H7G3_POPTR B9H7G3_POPTR B9HCY7_POPTR B9HCY7_POPTR B9HFC3_POPTR B9HFC3_POPTR B9HI15_POPTR B9HI15_POPTR B9HYD8_POPTR B9HYD8_POPTR B9I0Q8_POPTR B9I0Q8_POPTR POPTR_T102400 POPTR_T102400 B9I289_POPTR B9I289_POPTR B9I955_POPTR B9I955_POPTR B9IAP5_POPTR B9IAP5_POPTR U5FIR9_POPTR U5FIR9_POPTR U5GBD9_POPTR U5GBD9_POPTR U5GPZ5_POPTR U5GPZ5_POPTR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
B9IGD0_POPTRUncharacterized protein. (605 aa)
POPTR_T059000Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (414 aa)
A0A2K1X7Y4Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (412 aa)
A0A2K1X945Uncharacterized protein. (257 aa)
A0A2K1XE00Neutral ceramidase. (776 aa)
A0A2K1YGB9Uncharacterized protein. (593 aa)
A0A2K1Z2F7Neutral ceramidase. (780 aa)
A0A2K1ZEW5Dihydrolipoyl dehydrogenase. (511 aa)
A0A2K1ZUZ2Uncharacterized protein. (256 aa)
A0A2K2A0W4Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (364 aa)
A0A2K2AQA0Uncharacterized protein. (582 aa)
A0A2K2ARA3Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (414 aa)
A0A2K2BFD4Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (488 aa)
A0A2K2CBT0Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (548 aa)
A0A3N7FUP1Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (553 aa)
A0A3N7G994Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (92 aa)
A4ZSZ4_POPTRActin. (377 aa)
COMT1Caffeic acid 3-O-methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (364 aa)
A9P8T1_POPTRNAC-A/B domain-containing protein. (204 aa)
A9P8T6_POPTRUncharacterized protein. (377 aa)
A9P937_POPTRUncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (358 aa)
A9PA21_POPTRNAC-A/B domain-containing protein. (205 aa)
A9PA83_POPTRHistone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
A9PB21_POPTRNAC-A/B domain-containing protein. (224 aa)
A9PD83_POPTRProteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (237 aa)
A9PI76_POPTRUncharacterized protein. (235 aa)
B2Z6Q7_POPTRCaffeic acid 3-O-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (364 aa)
B9GF13_POPTRAldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (485 aa)
B9GHS2_POPTRIsocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (503 aa)
B9GIW2_POPTRNeutral ceramidase. (780 aa)
B9GJ54_POPTRUncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (371 aa)
B9GNC8_POPTRUncharacterized protein. (249 aa)
B9GQ43_POPTRNeutral ceramidase. (752 aa)
B9GRR9_POPTRUncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (359 aa)
B9H7G3_POPTRAldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (488 aa)
B9HCY7_POPTRUncharacterized protein. (605 aa)
B9HFC3_POPTRAldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (480 aa)
B9HI15_POPTRIsocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (428 aa)
B9HYD8_POPTRIsocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (428 aa)
B9I0Q8_POPTRUncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (356 aa)
POPTR_T102400Uncharacterized protein. (593 aa)
B9I289_POPTRNAC-A/B domain-containing protein. (229 aa)
B9I955_POPTRUncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (388 aa)
B9IAP5_POPTRUncharacterized protein. (253 aa)
U5FIR9_POPTRUncharacterized protein. (582 aa)
U5GBD9_POPTRNAC-A/B domain-containing protein. (202 aa)
U5GPZ5_POPTRUncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (359 aa)
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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