STRINGSTRING
A9P8N4_POPTR A9P8N4_POPTR A0A2K1Y631 A0A2K1Y631 A0A2K1YY92 A0A2K1YY92 A0A2K1Z2E5 A0A2K1Z2E5 A0A2K1ZTE5 A0A2K1ZTE5 A0A2K2AS36 A0A2K2AS36 A0A2K2B630 A0A2K2B630 A0A2K2BL31 A0A2K2BL31 A0A2K2BVJ8 A0A2K2BVJ8 A0A3N7EP63 A0A3N7EP63 A0A3N7FB43 A0A3N7FB43 A0A3N7FII9 A0A3N7FII9 A0A3N7G7Y2 A0A3N7G7Y2 A0A3N7G941 A0A3N7G941 A0A3N7G994 A0A3N7G994 A0A3N7GHC3 A0A3N7GHC3 A9P807_POPTR A9P807_POPTR A9P8K3_POPTR A9P8K3_POPTR A9P8Q5_POPTR A9P8Q5_POPTR A9P941_POPTR A9P941_POPTR A9PA00_POPTR A9PA00_POPTR A9PA83_POPTR A9PA83_POPTR A9PAR0_POPTR A9PAR0_POPTR A9PBI2_POPTR A9PBI2_POPTR A9PBZ4_POPTR A9PBZ4_POPTR A9PC90_POPTR A9PC90_POPTR A9PCN3_POPTR A9PCN3_POPTR A9PDD3_POPTR A9PDD3_POPTR A9PDD5_POPTR A9PDD5_POPTR A9PE87_POPTR A9PE87_POPTR A9PFP2_POPTR A9PFP2_POPTR A9PG38_POPTR A9PG38_POPTR A9PH67_POPTR A9PH67_POPTR A9PHA3_POPTR A9PHA3_POPTR A9PHX4_POPTR A9PHX4_POPTR A9PI59_POPTR A9PI59_POPTR B9GJB1_POPTR B9GJB1_POPTR B9GSZ3_POPTR B9GSZ3_POPTR B9H5U1_POPTR B9H5U1_POPTR B9HB69_POPTR B9HB69_POPTR B9HI47_POPTR B9HI47_POPTR B9HLP2_POPTR B9HLP2_POPTR B9HUV8_POPTR B9HUV8_POPTR B9HXH1_POPTR B9HXH1_POPTR B9I0P1_POPTR B9I0P1_POPTR MYB2 MYB2 U5G1M0_POPTR U5G1M0_POPTR U5GCI2_POPTR U5GCI2_POPTR U5GKP7_POPTR U5GKP7_POPTR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A9P8N4_POPTRProfilin; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations. (131 aa)
A0A2K1Y631Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. (316 aa)
A0A2K1YY92GTP_EFTU_D3 domain-containing protein. (115 aa)
A0A2K1Z2E5Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (450 aa)
A0A2K1ZTE5Glutathione peroxidase; Belongs to the glutathione peroxidase family. (203 aa)
A0A2K2AS36Histone H2B; Belongs to the histone H2B family. (149 aa)
A0A2K2B630Glutathione peroxidase; Belongs to the glutathione peroxidase family. (238 aa)
A0A2K2BL31S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. (397 aa)
A0A2K2BVJ8Glutathione peroxidase; Belongs to the glutathione peroxidase family. (168 aa)
A0A3N7EP63Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (390 aa)
A0A3N7FB43Glutathione peroxidase; Belongs to the glutathione peroxidase family. (190 aa)
A0A3N7FII9Histone H2B; Belongs to the histone H2B family. (148 aa)
A0A3N7G7Y2Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (342 aa)
A0A3N7G941Glutathione peroxidase; Belongs to the glutathione peroxidase family. (174 aa)
A0A3N7G994Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (92 aa)
A0A3N7GHC3Histone H2B; Belongs to the histone H2B family. (230 aa)
A9P807_POPTRGlyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (341 aa)
A9P8K3_POPTRProfilin; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations. (131 aa)
A9P8Q5_POPTRHistone H2B; Belongs to the histone H2B family. (139 aa)
A9P941_POPTRUncharacterized protein. (193 aa)
A9PA00_POPTRGlyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (338 aa)
A9PA83_POPTRHistone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
A9PAR0_POPTRElongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (449 aa)
A9PBI2_POPTRProfilin; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations. (131 aa)
A9PBZ4_POPTRElongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (449 aa)
A9PC90_POPTRHistone H2B; Belongs to the histone H2B family. (139 aa)
A9PCN3_POPTRUncharacterized protein. (193 aa)
A9PDD3_POPTRElongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (449 aa)
A9PDD5_POPTRHistone H2B; Belongs to the histone H2B family. (143 aa)
A9PE87_POPTRTubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (449 aa)
A9PFP2_POPTRGlutathione peroxidase; Belongs to the glutathione peroxidase family. (170 aa)
A9PG38_POPTRElongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (449 aa)
A9PH67_POPTRElongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (447 aa)
A9PHA3_POPTRGlyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (422 aa)
A9PHX4_POPTRProfilin; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations. (131 aa)
A9PI59_POPTRGlyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (404 aa)
B9GJB1_POPTRGlyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (337 aa)
B9GSZ3_POPTRS-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. (392 aa)
B9H5U1_POPTRGlyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (452 aa)
B9HB69_POPTRGlutathione peroxidase; Belongs to the glutathione peroxidase family. (232 aa)
B9HI47_POPTRGlyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (422 aa)
B9HLP2_POPTRElongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (449 aa)
B9HUV8_POPTRHistone H2B; Belongs to the histone H2B family. (140 aa)
B9HXH1_POPTRS-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. (395 aa)
B9I0P1_POPTRUncharacterized protein. (193 aa)
MYB2MYB transcription factor. (333 aa)
U5G1M0_POPTRHistone H2B; Belongs to the histone H2B family. (145 aa)
U5GCI2_POPTRHistone H2B; Belongs to the histone H2B family. (148 aa)
U5GKP7_POPTRHistone H2B; Belongs to the histone H2B family. (147 aa)
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.