21 items (Populus trichocarpa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2K2C9E5	Uncharacterized protein; Belongs to the cytochrome P450 family. (327 aa)
	A0A2K2CD03	Uncharacterized protein; Belongs to the cytochrome P450 family. (474 aa)
	A0A3N7EY09	Uncharacterized protein. (413 aa)
	B9HBL7_POPTR	Uncharacterized protein; Belongs to the cytochrome P450 family. (484 aa)
	B9HRH0_POPTR	Uncharacterized protein. (413 aa)
	B9IN30_POPTR	Uncharacterized protein. (478 aa)
	B9IQE3_POPTR	Uncharacterized protein; Belongs to the cytochrome P450 family. (476 aa)
	POPTR_T116000	Uncharacterized protein. (269 aa)
	U5FSL8_POPTR	Uncharacterized protein; Belongs to the cytochrome P450 family. (486 aa)
	POPTR_T168000	Uncharacterized protein. (348 aa)
	POPTR_T167900	Uncharacterized protein; Belongs to the cytochrome P450 family. (478 aa)
	A0A2K1WRF7	Uncharacterized protein; Belongs to the cytochrome P450 family. (478 aa)
	A0A2K1X0C2	Uncharacterized protein. (475 aa)
	A0A2K1X0D3	Uncharacterized protein. (479 aa)
	A0A2K1X113	Uncharacterized protein; Belongs to the cytochrome P450 family. (481 aa)
	A0A2K1Y405	Uncharacterized protein. (509 aa)
	A0A2K1YKY4	Uncharacterized protein; Belongs to the cytochrome P450 family. (482 aa)
	A0A2K1ZLH3	Uncharacterized protein; Belongs to the cytochrome P450 family. (510 aa)
	A0A2K1ZLQ6	Uncharacterized protein; Belongs to the cytochrome P450 family. (487 aa)
	A0A2K1ZQR6	Uncharacterized protein; Belongs to the cytochrome P450 family. (509 aa)
	A0A2K2BQ74	Uncharacterized protein; Belongs to the cytochrome P450 family. (409 aa)

Your Current Organism:

Populus trichocarpa

NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2K1WRF7	A0A2K1ZLH3	A0A2K1WRF7	A0A2K1ZLH3	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.414
A0A2K1WRF7	A0A2K1ZQR6	A0A2K1WRF7	A0A2K1ZQR6	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.415
A0A2K1WRF7	A0A2K2C9E5	A0A2K1WRF7	A0A2K2C9E5	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.402
A0A2K1WRF7	POPTR_T116000	A0A2K1WRF7	B9NHJ0	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.625
A0A2K1X0C2	A0A2K1ZLH3	A0A2K1X0C2	A0A2K1ZLH3	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.410
A0A2K1X0C2	A0A2K1ZQR6	A0A2K1X0C2	A0A2K1ZQR6	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.413
A0A2K1X0C2	POPTR_T116000	A0A2K1X0C2	B9NHJ0	Uncharacterized protein.	Uncharacterized protein.	0.625
A0A2K1X0D3	A0A2K1ZLH3	A0A2K1X0D3	A0A2K1ZLH3	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.407
A0A2K1X0D3	A0A2K1ZQR6	A0A2K1X0D3	A0A2K1ZQR6	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.414
A0A2K1X0D3	POPTR_T116000	A0A2K1X0D3	B9NHJ0	Uncharacterized protein.	Uncharacterized protein.	0.625
A0A2K1X113	POPTR_T116000	A0A2K1X113	B9NHJ0	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.625
A0A2K1Y405	A0A2K1ZLH3	A0A2K1Y405	A0A2K1ZLH3	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.408
A0A2K1Y405	A0A2K1ZQR6	A0A2K1Y405	A0A2K1ZQR6	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.410
A0A2K1Y405	POPTR_T116000	A0A2K1Y405	B9NHJ0	Uncharacterized protein.	Uncharacterized protein.	0.625
A0A2K1YKY4	A0A2K1ZLH3	A0A2K1YKY4	A0A2K1ZLH3	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.403
A0A2K1YKY4	A0A2K1ZQR6	A0A2K1YKY4	A0A2K1ZQR6	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.415
A0A2K1YKY4	POPTR_T116000	A0A2K1YKY4	B9NHJ0	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.625
A0A2K1ZLH3	A0A2K1WRF7	A0A2K1ZLH3	A0A2K1WRF7	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.414
A0A2K1ZLH3	A0A2K1X0C2	A0A2K1ZLH3	A0A2K1X0C2	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.410
A0A2K1ZLH3	A0A2K1X0D3	A0A2K1ZLH3	A0A2K1X0D3	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.407

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