66 items (Populus trichocarpa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	B9HTB5_POPTR	Aa_trans domain-containing protein. (439 aa)
	B9HMA0_POPTR	S-adenosylmethionine decarboxylase proenzyme. (341 aa)
	B9HTG7_POPTR	RING-type domain-containing protein. (276 aa)
	B9HIM5_POPTR	Uncharacterized protein. (173 aa)
	B9HI47_POPTR	Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (422 aa)
	B9HDB4_POPTR	PPM-type phosphatase domain-containing protein. (548 aa)
	B9H5U1_POPTR	Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (452 aa)
	B9GVD6_POPTR	PPM-type phosphatase domain-containing protein. (546 aa)
	B9GSH7_POPTR	Uncharacterized protein. (153 aa)
	B9GMB5_POPTR	Epimerase domain-containing protein. (342 aa)
	B9GMA1_POPTR	Uncharacterized protein. (596 aa)
	B9GJB5_POPTR	Aa_trans domain-containing protein. (448 aa)
	POPTR_T137100	PPM-type phosphatase domain-containing protein. (357 aa)
	POPTR_T063000	PPM-type phosphatase domain-containing protein. (388 aa)
	A0A2K1WWK4	PPM-type phosphatase domain-containing protein. (548 aa)
	A0A2K1XGN5	PPM-type phosphatase domain-containing protein. (356 aa)
	U5GTL3_POPTR	Epimerase domain-containing protein. (337 aa)
	U5GPI6_POPTR	Epimerase domain-containing protein. (341 aa)
	U5GGN6_POPTR	Uncharacterized protein. (149 aa)
	B9N3A0_POPTR	Uncharacterized protein; Belongs to the calmodulin family. (149 aa)
	B9IPL3_POPTR	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (239 aa)
	B9IM87_POPTR	S-adenosylmethionine decarboxylase proenzyme. (396 aa)
	B9IJZ4_POPTR	Uncharacterized protein. (212 aa)
	B9IJT3_POPTR	PHB domain-containing protein. (285 aa)
	B9IF65_POPTR	Aa_trans domain-containing protein. (447 aa)
	B9I570_POPTR	PPM-type phosphatase domain-containing protein. (370 aa)
	B9HX36_POPTR	Uncharacterized protein. (173 aa)
	B9GJB7_POPTR	Aa_trans domain-containing protein. (449 aa)
	A0A2K1XMG9	PPM-type phosphatase domain-containing protein. (393 aa)
	A0A2K1YD08	PPM-type phosphatase domain-containing protein. (389 aa)
	A0A2K1YMZ5	S-adenosylmethionine decarboxylase proenzyme. (345 aa)
	A0A2K1YTH9	S-adenosylmethionine decarboxylase proenzyme. (355 aa)
	A0A2K1YX62	PPM-type phosphatase domain-containing protein. (397 aa)
	A0A2K1YYM0	Phenylalanine ammonia-lyase. (707 aa)
	A0A2K1Z1C5	Uncharacterized protein. (516 aa)
	A0A2K1Z258	RING-type domain-containing protein. (226 aa)
	A0A2K1Z2A7	PPM-type phosphatase domain-containing protein. (439 aa)
	A0A2K1ZE65	Uncharacterized protein. (169 aa)
	A0A2K2BAD4	Uncharacterized protein. (597 aa)
	A0A2K2BMN3	Uncharacterized protein. (1305 aa)
	A0A2K2BSB2	Epimerase domain-containing protein. (337 aa)
	A0A2K2BSB6	Epimerase domain-containing protein. (236 aa)
	A0A2K2BUV8	PPM-type phosphatase domain-containing protein. (388 aa)
	A0A2K2C1U1	Uncharacterized protein; Belongs to the calmodulin family. (191 aa)
	A0A3N7EP63	Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (390 aa)
	A0A3N7FRP7	Uncharacterized protein. (210 aa)
	A0A3N7FW50	Epimerase domain-containing protein. (268 aa)
	A0A3N7FZB1	PPM-type phosphatase domain-containing protein. (394 aa)
	A0A3N7G078	Uncharacterized protein. (1114 aa)
	A0A3N7G7Y2	Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (342 aa)
	A9P807_POPTR	Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (341 aa)
	METK1	S-adenosylmethionine synthase 1; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The reaction comprises two steps that are both catalyzed by the same enzyme: formation of S-adenosylmethionine (AdoMet) and triphosphate, and subsequent hydrolysis of the triphosphate. (392 aa)
	A9P8A2_POPTR	Uncharacterized protein; Belongs to the calmodulin family. (149 aa)
	A9PA00_POPTR	Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (338 aa)
	A9PDT9_POPTR	Uncharacterized protein; Belongs to the calmodulin family. (149 aa)
	A9PFF1_POPTR	S-adenosylmethionine decarboxylase proenzyme. (361 aa)
	A9PFK6_POPTR	PPM-type phosphatase domain-containing protein. (390 aa)
	A9PHA3_POPTR	Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (422 aa)
	A9PHD3_POPTR	S-adenosylmethionine decarboxylase proenzyme. (361 aa)
	A9PI59_POPTR	Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (404 aa)
	B2Z6Q2_POPTR	Cinnamoyl CoA reductase. (338 aa)
	B2Z6R0_POPTR	Phenylalanine ammonia-lyase. (715 aa)
	B2Z6R1_POPTR	Phenylalanine ammonia-lyase. (714 aa)
	B2Z6R3_POPTR	Phenylalanine ammonia-lyase. (711 aa)
	B2Z6R4_POPTR	Phenylalanine ammonia-lyase. (711 aa)
	B9GJB1_POPTR	Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (337 aa)

Your Current Organism:

Populus trichocarpa

NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2K1XMG9	A0A2K1ZE65	A0A2K1XMG9	A0A2K1ZE65	PPM-type phosphatase domain-containing protein.	Uncharacterized protein.	0.493
A0A2K1XMG9	B9HIM5_POPTR	A0A2K1XMG9	B9HIM5	PPM-type phosphatase domain-containing protein.	Uncharacterized protein.	0.423
A0A2K1XMG9	B9HX36_POPTR	A0A2K1XMG9	B9HX36	PPM-type phosphatase domain-containing protein.	Uncharacterized protein.	0.423
A0A2K1XMG9	B9IM87_POPTR	A0A2K1XMG9	B9IM87	PPM-type phosphatase domain-containing protein.	S-adenosylmethionine decarboxylase proenzyme.	0.400
A0A2K1YD08	A0A2K1ZE65	A0A2K1YD08	A0A2K1ZE65	PPM-type phosphatase domain-containing protein.	Uncharacterized protein.	0.493
A0A2K1YD08	B9HIM5_POPTR	A0A2K1YD08	B9HIM5	PPM-type phosphatase domain-containing protein.	Uncharacterized protein.	0.423
A0A2K1YD08	B9HX36_POPTR	A0A2K1YD08	B9HX36	PPM-type phosphatase domain-containing protein.	Uncharacterized protein.	0.423
A0A2K1YD08	B9IM87_POPTR	A0A2K1YD08	B9IM87	PPM-type phosphatase domain-containing protein.	S-adenosylmethionine decarboxylase proenzyme.	0.400
A0A2K1YMZ5	A0A2K2BAD4	A0A2K1YMZ5	A0A2K2BAD4	S-adenosylmethionine decarboxylase proenzyme.	Uncharacterized protein.	0.451
A0A2K1YMZ5	A0A3N7EP63	A0A2K1YMZ5	A0A3N7EP63	S-adenosylmethionine decarboxylase proenzyme.	Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.	0.444
A0A2K1YMZ5	A9PI59_POPTR	A0A2K1YMZ5	A9PI59	S-adenosylmethionine decarboxylase proenzyme.	Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.	0.401
A0A2K1YMZ5	B9GMA1_POPTR	A0A2K1YMZ5	B9GMA1	S-adenosylmethionine decarboxylase proenzyme.	Uncharacterized protein.	0.451
A0A2K1YMZ5	B9H5U1_POPTR	A0A2K1YMZ5	B9H5U1	S-adenosylmethionine decarboxylase proenzyme.	Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.	0.444
A0A2K1YMZ5	B9IJT3_POPTR	A0A2K1YMZ5	B9IJT3	S-adenosylmethionine decarboxylase proenzyme.	PHB domain-containing protein.	0.450
A0A2K1YMZ5	METK1	A0A2K1YMZ5	A9P822	S-adenosylmethionine decarboxylase proenzyme.	S-adenosylmethionine synthase 1; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The reaction comprises two steps that are both catalyzed by the same enzyme: formation of S-adenosylmethionine (AdoMet) and triphosphate, and subsequent hydrolysis of the triphosphate.	0.772
A0A2K1YTH9	A0A2K2BAD4	A0A2K1YTH9	A0A2K2BAD4	S-adenosylmethionine decarboxylase proenzyme.	Uncharacterized protein.	0.430
A0A2K1YTH9	A0A2K2BUV8	A0A2K1YTH9	A0A2K2BUV8	S-adenosylmethionine decarboxylase proenzyme.	PPM-type phosphatase domain-containing protein.	0.515
A0A2K1YTH9	A0A3N7EP63	A0A2K1YTH9	A0A3N7EP63	S-adenosylmethionine decarboxylase proenzyme.	Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.	0.576
A0A2K1YTH9	A0A3N7FZB1	A0A2K1YTH9	A0A3N7FZB1	S-adenosylmethionine decarboxylase proenzyme.	PPM-type phosphatase domain-containing protein.	0.407
A0A2K1YTH9	A9PHA3_POPTR	A0A2K1YTH9	A9PHA3	S-adenosylmethionine decarboxylase proenzyme.	Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.	0.576

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