STRINGSTRING
POPTR_T137100 POPTR_T137100 POPTR_T063000 POPTR_T063000 A0A2K1WWK4 A0A2K1WWK4 A0A2K1XGN5 A0A2K1XGN5 A0A2K1XMG9 A0A2K1XMG9 A0A2K1YD08 A0A2K1YD08 A0A2K1YX62 A0A2K1YX62 A0A2K1Z2A7 A0A2K1Z2A7 A0A2K2A0W4 A0A2K2A0W4 A0A2K2BUV8 A0A2K2BUV8 A0A3N7FZB1 A0A3N7FZB1 psbD psbD psaB psaB psaA psaA rbcL rbcL psbB psbB COMT1 COMT1 A9P8D8_POPTR A9P8D8_POPTR A9P937_POPTR A9P937_POPTR POPTR_T066900 POPTR_T066900 A9PFK6_POPTR A9PFK6_POPTR B2Z6Q7_POPTR B2Z6Q7_POPTR B9GJ54_POPTR B9GJ54_POPTR B9GRR9_POPTR B9GRR9_POPTR SuSy3 SuSy3 B9GVD6_POPTR B9GVD6_POPTR B9HDB4_POPTR B9HDB4_POPTR B9I0Q8_POPTR B9I0Q8_POPTR B9I570_POPTR B9I570_POPTR B9I955_POPTR B9I955_POPTR B9ILP9_POPTR B9ILP9_POPTR B9IPE5_POPTR B9IPE5_POPTR U5GPZ5_POPTR U5GPZ5_POPTR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
POPTR_T137100PPM-type phosphatase domain-containing protein. (357 aa)
POPTR_T063000PPM-type phosphatase domain-containing protein. (388 aa)
A0A2K1WWK4PPM-type phosphatase domain-containing protein. (548 aa)
A0A2K1XGN5PPM-type phosphatase domain-containing protein. (356 aa)
A0A2K1XMG9PPM-type phosphatase domain-containing protein. (393 aa)
A0A2K1YD08PPM-type phosphatase domain-containing protein. (389 aa)
A0A2K1YX62PPM-type phosphatase domain-containing protein. (397 aa)
A0A2K1Z2A7PPM-type phosphatase domain-containing protein. (439 aa)
A0A2K2A0W4Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (364 aa)
A0A2K2BUV8PPM-type phosphatase domain-containing protein. (388 aa)
A0A3N7FZB1PPM-type phosphatase domain-containing protein. (394 aa)
psbDPhotosystem II D2 protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. D2 is needed for assembly of a stable PSII complex. (353 aa)
psaBPhotosystem I P700 chlorophyll a apoprotein A2; PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin. (734 aa)
psaAPhotosystem I P700 chlorophyll a apoprotein A1; PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin. (750 aa)
rbcLRibulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily. (475 aa)
psbBPhotosystem II CP47 reaction center protein; One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light- induced photochemical processes of PSII. PSII is a light-driven water:plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation; Belongs to the PsbB/PsbC family. PsbB subfamily. (508 aa)
COMT1Caffeic acid 3-O-methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (364 aa)
A9P8D8_POPTRPeroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. (218 aa)
A9P937_POPTRUncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (358 aa)
POPTR_T066900Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. (162 aa)
A9PFK6_POPTRPPM-type phosphatase domain-containing protein. (390 aa)
B2Z6Q7_POPTRCaffeic acid 3-O-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (364 aa)
B9GJ54_POPTRUncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (371 aa)
B9GRR9_POPTRUncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (359 aa)
SuSy3Sucrose synthase; Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Belongs to the glycosyltransferase 1 family. Plant sucrose synthase subfamily. (811 aa)
B9GVD6_POPTRPPM-type phosphatase domain-containing protein. (546 aa)
B9HDB4_POPTRPPM-type phosphatase domain-containing protein. (548 aa)
B9I0Q8_POPTRUncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (356 aa)
B9I570_POPTRPPM-type phosphatase domain-containing protein. (370 aa)
B9I955_POPTRUncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (388 aa)
B9ILP9_POPTRPeroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. (162 aa)
B9IPE5_POPTRPeroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. (203 aa)
U5GPZ5_POPTRUncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (359 aa)
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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