STRINGSTRING
POPTR_T063000 POPTR_T063000 A0A2K1WWK4 A0A2K1WWK4 A0A2K1XGN5 A0A2K1XGN5 A0A2K1XMG9 A0A2K1XMG9 A0A2K1YD08 A0A2K1YD08 A0A2K1YX62 A0A2K1YX62 A0A2K1Z0Z5 A0A2K1Z0Z5 POPTR_T137100 POPTR_T137100 A0A2K1Z2A7 A0A2K1Z2A7 A0A2K1ZP65 A0A2K1ZP65 A0A2K2AGH2 A0A2K2AGH2 A0A2K2BUV8 A0A2K2BUV8 A0A3N7EGL1 A0A3N7EGL1 A0A3N7FZB1 A0A3N7FZB1 A9PFK6_POPTR A9PFK6_POPTR B9GVD6_POPTR B9GVD6_POPTR B9HA49_POPTR B9HA49_POPTR B9HDB4_POPTR B9HDB4_POPTR B9I570_POPTR B9I570_POPTR B9IKW9_POPTR B9IKW9_POPTR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
POPTR_T063000PPM-type phosphatase domain-containing protein. (388 aa)
A0A2K1WWK4PPM-type phosphatase domain-containing protein. (548 aa)
A0A2K1XGN5PPM-type phosphatase domain-containing protein. (356 aa)
A0A2K1XMG9PPM-type phosphatase domain-containing protein. (393 aa)
A0A2K1YD08PPM-type phosphatase domain-containing protein. (389 aa)
A0A2K1YX62PPM-type phosphatase domain-containing protein. (397 aa)
A0A2K1Z0Z5Uncharacterized protein. (386 aa)
POPTR_T137100PPM-type phosphatase domain-containing protein. (357 aa)
A0A2K1Z2A7PPM-type phosphatase domain-containing protein. (439 aa)
A0A2K1ZP65Zeaxanthin epoxidase, chloroplastic; Converts zeaxanthin into antheraxanthin and subsequently violaxanthin. (662 aa)
A0A2K2AGH2Zeaxanthin epoxidase, chloroplastic; Converts zeaxanthin into antheraxanthin and subsequently violaxanthin. (662 aa)
A0A2K2BUV8PPM-type phosphatase domain-containing protein. (388 aa)
A0A3N7EGL1FAD_binding_3 domain-containing protein. (499 aa)
A0A3N7FZB1PPM-type phosphatase domain-containing protein. (394 aa)
A9PFK6_POPTRPPM-type phosphatase domain-containing protein. (390 aa)
B9GVD6_POPTRPPM-type phosphatase domain-containing protein. (546 aa)
B9HA49_POPTRRNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. (1198 aa)
B9HDB4_POPTRPPM-type phosphatase domain-containing protein. (548 aa)
B9I570_POPTRPPM-type phosphatase domain-containing protein. (370 aa)
B9IKW9_POPTRRNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. (1200 aa)
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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