57 items (Populus trichocarpa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2K1Y6D4	KH domain-containing protein. (280 aa)
	B9IHZ7_POPTR	Uncharacterized protein. (285 aa)
	B9IEM3_POPTR	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family. (233 aa)
	B9IDP1_POPTR	Uncharacterized protein. (685 aa)
	B9HL63_POPTR	KH domain-containing protein. (99 aa)
	B9HI86_POPTR	Uncharacterized protein. (545 aa)
	B9HFL8_POPTR	Uncharacterized protein. (523 aa)
	B9H2A6_POPTR	Uncharacterized protein. (623 aa)
	B9H067_POPTR	Uncharacterized protein. (794 aa)
	B9GYL2_POPTR	Uncharacterized protein. (315 aa)
	B9GNA5_POPTR	Uncharacterized protein. (680 aa)
	A0A2K1WQZ7	Uncharacterized protein. (767 aa)
	A0A2K1WTU2	Uncharacterized protein. (460 aa)
	A0A2K1X335	Uncharacterized protein. (745 aa)
	A0A2K1X6J7	Uncharacterized protein. (730 aa)
	A0A2K1XFH6	KH domain-containing protein. (281 aa)
	B9GLM3_POPTR	C3H family protein. (304 aa)
	B9GHS1_POPTR	S1 motif domain-containing protein. (965 aa)
	B9GHJ4_POPTR	KH domain-containing protein. (302 aa)
	A0A2K1Y0U1	Uncharacterized protein. (527 aa)
	A0A2K1Y250	S1 motif domain-containing protein. (926 aa)
	A0A2K1YYY6	Uncharacterized protein. (323 aa)
	A0A2K1Y3N1	Uncharacterized protein. (753 aa)
	A0A2K1Y7G0	Uncharacterized protein. (683 aa)
	A0A2K1YH94	Uncharacterized protein. (624 aa)
	A9PHW0_POPTR	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family. (232 aa)
	A9PGS1_POPTR	KH domain-containing protein. (294 aa)
	A9PBQ6_POPTR	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family. (236 aa)
	A9PAW1_POPTR	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family. (234 aa)
	A0A3N7G9S0	Uncharacterized protein. (546 aa)
	A0A3N7G9A3	S1 motif domain-containing protein. (931 aa)
	A0A3N7FXG7	Uncharacterized protein. (341 aa)
	A0A3N7FN94	Uncharacterized protein. (543 aa)
	A0A3N7FB71	Uncharacterized protein. (781 aa)
	A0A3N7F9L8	Uncharacterized protein. (296 aa)
	A0A3N7F4Y3	Uncharacterized protein. (700 aa)
	A0A2K2CEA1	KH domain-containing protein. (223 aa)
	A0A2K2BZX3	KH domain-containing protein. (484 aa)
	A0A2K2BQI1	KH domain-containing protein. (768 aa)
	A0A2K2BAM8	KH domain-containing protein. (780 aa)
	A0A2K2AC57	Uncharacterized protein. (529 aa)
	A0A2K2A0E2	KH domain-containing protein. (284 aa)
	A0A2K1ZT01	Uncharacterized protein. (755 aa)
	A0A2K1ZQ95	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (383 aa)
	A0A2K1ZAU3	Uncharacterized protein. (334 aa)
	U5GU85_POPTR	Uncharacterized protein. (809 aa)
	U5GEX7_POPTR	Uncharacterized protein. (458 aa)
	U5G8F3_POPTR	Uncharacterized protein. (338 aa)
	U5G0N5_POPTR	KH domain-containing protein. (301 aa)
	U5G067_POPTR	KH domain-containing protein. (221 aa)
	U5FZV8_POPTR	Uncharacterized protein. (641 aa)
	POPTR_T111100	Uncharacterized protein. (284 aa)
	U5FMI1_POPTR	Uncharacterized protein. (545 aa)
	U5FHB3_POPTR	Uncharacterized protein. (338 aa)
	B9N0F3_POPTR	KH domain-containing protein. (294 aa)
	B9INJ7_POPTR	KH domain-containing protein. (280 aa)
	B9INI7_POPTR	Uncharacterized protein. (688 aa)

Your Current Organism:

Populus trichocarpa

NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2K1WQZ7	A0A2K1WTU2	A0A2K1WQZ7	A0A2K1WTU2	Uncharacterized protein.	Uncharacterized protein.	0.408
A0A2K1WQZ7	A0A2K2BAM8	A0A2K1WQZ7	A0A2K2BAM8	Uncharacterized protein.	KH domain-containing protein.	0.489
A0A2K1WQZ7	A0A2K2BQI1	A0A2K1WQZ7	A0A2K2BQI1	Uncharacterized protein.	KH domain-containing protein.	0.479
A0A2K1WQZ7	U5GEX7_POPTR	A0A2K1WQZ7	U5GEX7	Uncharacterized protein.	Uncharacterized protein.	0.408
A0A2K1WTU2	A0A2K1WQZ7	A0A2K1WTU2	A0A2K1WQZ7	Uncharacterized protein.	Uncharacterized protein.	0.408
A0A2K1WTU2	A0A2K1Y3N1	A0A2K1WTU2	A0A2K1Y3N1	Uncharacterized protein.	Uncharacterized protein.	0.408
A0A2K1Y250	A0A3N7G9A3	A0A2K1Y250	A0A3N7G9A3	S1 motif domain-containing protein.	S1 motif domain-containing protein.	0.900
A0A2K1Y250	B9GHS1_POPTR	A0A2K1Y250	B9GHS1	S1 motif domain-containing protein.	S1 motif domain-containing protein.	0.912
A0A2K1Y3N1	A0A2K1WTU2	A0A2K1Y3N1	A0A2K1WTU2	Uncharacterized protein.	Uncharacterized protein.	0.408
A0A2K1Y3N1	A0A2K2BAM8	A0A2K1Y3N1	A0A2K2BAM8	Uncharacterized protein.	KH domain-containing protein.	0.487
A0A2K1Y3N1	A0A2K2BQI1	A0A2K1Y3N1	A0A2K2BQI1	Uncharacterized protein.	KH domain-containing protein.	0.475
A0A2K1Y3N1	B9H2A6_POPTR	A0A2K1Y3N1	B9H2A6	Uncharacterized protein.	Uncharacterized protein.	0.407
A0A2K1Y3N1	U5GEX7_POPTR	A0A2K1Y3N1	U5GEX7	Uncharacterized protein.	Uncharacterized protein.	0.408
A0A2K1ZQ95	A0A2K2CEA1	A0A2K1ZQ95	A0A2K2CEA1	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	KH domain-containing protein.	0.973
A0A2K1ZQ95	A9PAW1_POPTR	A0A2K1ZQ95	A9PAW1	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.	0.832
A0A2K1ZQ95	A9PBQ6_POPTR	A0A2K1ZQ95	A9PBQ6	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.	0.832
A0A2K1ZQ95	A9PHW0_POPTR	A0A2K1ZQ95	A9PHW0	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.	0.832
A0A2K1ZQ95	B9IEM3_POPTR	A0A2K1ZQ95	B9IEM3	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.	0.832
A0A2K1ZQ95	U5G067_POPTR	A0A2K1ZQ95	U5G067	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	KH domain-containing protein.	0.973
A0A2K2BAM8	A0A2K1WQZ7	A0A2K2BAM8	A0A2K1WQZ7	KH domain-containing protein.	Uncharacterized protein.	0.489

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