14 items (Populus trichocarpa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2K2C1F0	Uncharacterized protein; Belongs to the argonaute family. (985 aa)
	A0A2K1WVY3	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1669 aa)
	A0A2K1XH60	Uncharacterized protein; Belongs to the argonaute family. (875 aa)
	A0A2K1YQS3	Uncharacterized protein; Belongs to the argonaute family. (996 aa)
	A0A2K1Z0F1	Uncharacterized protein; Belongs to the argonaute family. (969 aa)
	A0A2K1ZDH2	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1407 aa)
	A0A2K2A0S9	Uncharacterized protein; Belongs to the argonaute family. (926 aa)
	A0A3N7FU59	Uncharacterized protein; Belongs to the argonaute family. (1170 aa)
	A0A3N7G4I8	PAZ domain-containing protein. (588 aa)
	B9HAP9_POPTR	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1638 aa)
	B9HKB5_POPTR	Uncharacterized protein; Belongs to the argonaute family. (996 aa)
	B9HXP0_POPTR	Uncharacterized protein; Belongs to the argonaute family. (1030 aa)
	B9I4Y6_POPTR	Uncharacterized protein; Belongs to the argonaute family. (1062 aa)
	U5GLQ5_POPTR	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1967 aa)

Your Current Organism:

Populus trichocarpa

NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2K1WVY3	A0A2K1XH60	A0A2K1WVY3	A0A2K1XH60	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	Uncharacterized protein; Belongs to the argonaute family.	0.677
A0A2K1WVY3	A0A2K1YQS3	A0A2K1WVY3	A0A2K1YQS3	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	Uncharacterized protein; Belongs to the argonaute family.	0.677
A0A2K1WVY3	A0A2K1Z0F1	A0A2K1WVY3	A0A2K1Z0F1	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	Uncharacterized protein; Belongs to the argonaute family.	0.722
A0A2K1WVY3	A0A2K2A0S9	A0A2K1WVY3	A0A2K2A0S9	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	Uncharacterized protein; Belongs to the argonaute family.	0.722
A0A2K1WVY3	A0A2K2C1F0	A0A2K1WVY3	A0A2K2C1F0	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	Uncharacterized protein; Belongs to the argonaute family.	0.722
A0A2K1WVY3	A0A3N7FU59	A0A2K1WVY3	A0A3N7FU59	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	Uncharacterized protein; Belongs to the argonaute family.	0.690
A0A2K1WVY3	A0A3N7G4I8	A0A2K1WVY3	A0A3N7G4I8	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	PAZ domain-containing protein.	0.690
A0A2K1WVY3	B9HKB5_POPTR	A0A2K1WVY3	B9HKB5	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	Uncharacterized protein; Belongs to the argonaute family.	0.677
A0A2K1WVY3	B9HXP0_POPTR	A0A2K1WVY3	B9HXP0	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	Uncharacterized protein; Belongs to the argonaute family.	0.762
A0A2K1WVY3	B9I4Y6_POPTR	A0A2K1WVY3	B9I4Y6	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	Uncharacterized protein; Belongs to the argonaute family.	0.677
A0A2K1XH60	A0A2K1WVY3	A0A2K1XH60	A0A2K1WVY3	Uncharacterized protein; Belongs to the argonaute family.	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	0.677
A0A2K1XH60	A0A2K1ZDH2	A0A2K1XH60	A0A2K1ZDH2	Uncharacterized protein; Belongs to the argonaute family.	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	0.680
A0A2K1XH60	B9HAP9_POPTR	A0A2K1XH60	B9HAP9	Uncharacterized protein; Belongs to the argonaute family.	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	0.716
A0A2K1XH60	U5GLQ5_POPTR	A0A2K1XH60	U5GLQ5	Uncharacterized protein; Belongs to the argonaute family.	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	0.771
A0A2K1YQS3	A0A2K1WVY3	A0A2K1YQS3	A0A2K1WVY3	Uncharacterized protein; Belongs to the argonaute family.	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	0.677
A0A2K1YQS3	A0A2K1ZDH2	A0A2K1YQS3	A0A2K1ZDH2	Uncharacterized protein; Belongs to the argonaute family.	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	0.680
A0A2K1YQS3	B9HAP9_POPTR	A0A2K1YQS3	B9HAP9	Uncharacterized protein; Belongs to the argonaute family.	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	0.716
A0A2K1YQS3	U5GLQ5_POPTR	A0A2K1YQS3	U5GLQ5	Uncharacterized protein; Belongs to the argonaute family.	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	0.758
A0A2K1Z0F1	A0A2K1WVY3	A0A2K1Z0F1	A0A2K1WVY3	Uncharacterized protein; Belongs to the argonaute family.	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	0.722
A0A2K1Z0F1	A0A2K1ZDH2	A0A2K1Z0F1	A0A2K1ZDH2	Uncharacterized protein; Belongs to the argonaute family.	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.	0.723

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