STRINGSTRING
A0A2K1WUY5 A0A2K1WUY5 A0A2K1XTE1 A0A2K1XTE1 A0A3N7EPY8 A0A3N7EPY8 POPTR_T171800 POPTR_T171800 A0A3N7HV82 A0A3N7HV82 psbA psbA psbK psbK psbI psbI atpA atpA atpF atpF atpH atpH atpI atpI petN petN psbM psbM psbD psbD psbC psbC psbZ psbZ psaB psaB psaA psaA atpE atpE atpB atpB psaI psaI petA petA psbJ psbJ psbL psbL psbF psbF psbE psbE petG petG psaJ psaJ psbB psbB psbT psbT psbH psbH petB petB petD petD psaC psaC A9PAP8_POPTR A9PAP8_POPTR A9PE72_POPTR A9PE72_POPTR A9PEJ0_POPTR A9PEJ0_POPTR A9PEP9_POPTR A9PEP9_POPTR A9PEV3_POPTR A9PEV3_POPTR A9PEX3_POPTR A9PEX3_POPTR A9PF82_POPTR A9PF82_POPTR A9PFE9_POPTR A9PFE9_POPTR A9PFK1_POPTR A9PFK1_POPTR A9PFR3_POPTR A9PFR3_POPTR A9PG34_POPTR A9PG34_POPTR A9PG57_POPTR A9PG57_POPTR A9PGA1_POPTR A9PGA1_POPTR A9PGC7_POPTR A9PGC7_POPTR A9PGP9_POPTR A9PGP9_POPTR A9PGS6_POPTR A9PGS6_POPTR A9PGV7_POPTR A9PGV7_POPTR A9PH06_POPTR A9PH06_POPTR A9PH94_POPTR A9PH94_POPTR A9PHA9_POPTR A9PHA9_POPTR A9PHM0_POPTR A9PHM0_POPTR A9PHN7_POPTR A9PHN7_POPTR A9PHU8_POPTR A9PHU8_POPTR A9PI20_POPTR A9PI20_POPTR A9PIG1_POPTR A9PIG1_POPTR B9GG14_POPTR B9GG14_POPTR B9GHJ1_POPTR B9GHJ1_POPTR B9GRD0_POPTR B9GRD0_POPTR B9GS65_POPTR B9GS65_POPTR B9GT03_POPTR B9GT03_POPTR POPTR_T091100 POPTR_T091100 B9H5C6_POPTR B9H5C6_POPTR B9H851_POPTR B9H851_POPTR B9HA54_POPTR B9HA54_POPTR B9HES1_POPTR B9HES1_POPTR B9HJW7_POPTR B9HJW7_POPTR B9HJY4_POPTR B9HJY4_POPTR B9HKP7_POPTR B9HKP7_POPTR B9HLC6_POPTR B9HLC6_POPTR B9HQ08_POPTR B9HQ08_POPTR B9HQ34_POPTR B9HQ34_POPTR B9HTF3_POPTR B9HTF3_POPTR B9HTN3_POPTR B9HTN3_POPTR B9HV47_POPTR B9HV47_POPTR B9HXY5_POPTR B9HXY5_POPTR B9HZK6_POPTR B9HZK6_POPTR B9I6H7_POPTR B9I6H7_POPTR B9IQM7_POPTR B9IQM7_POPTR B9MW43_POPTR B9MW43_POPTR B9MXF5_POPTR B9MXF5_POPTR B9MYU1_POPTR B9MYU1_POPTR B9MYW6_POPTR B9MYW6_POPTR B9NAB2_POPTR B9NAB2_POPTR U5G4Q2_POPTR U5G4Q2_POPTR U5GIT4_POPTR U5GIT4_POPTR U5GTX9_POPTR U5GTX9_POPTR U5GUC7_POPTR U5GUC7_POPTR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A2K1WUY5Uncharacterized protein. (130 aa)
A0A2K1XTE1Uncharacterized protein. (275 aa)
A0A3N7EPY8PsaL domain-containing protein. (262 aa)
POPTR_T171800Uncharacterized protein; Belongs to the ATPase B chain family. (220 aa)
A0A3N7HV82Cytochrome c domain-containing protein. (209 aa)
psbAPhotosystem II protein D1; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. (353 aa)
psbKPhotosystem II reaction center protein K; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. (64 aa)
psbIPhotosystem II reaction center protein I; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light- driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. (36 aa)
atpAATP synthase subunit alpha, chloroplastic; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. (507 aa)
atpFATP synthase subunit b, chloroplastic; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (184 aa)
atpHATP synthase subunit c, chloroplastic; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (81 aa)
atpIATP synthase subunit a, chloroplastic; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. (247 aa)
petNCytochrome b6-f complex subunit 8; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (29 aa)
psbMPhotosystem II reaction center protein M; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. This subunit is found at the monomer-monomer interface. (34 aa)
psbDPhotosystem II D2 protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. D2 is needed for assembly of a stable PSII complex. (353 aa)
psbCPhotosystem II CP43 reaction center protein; One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light- induced photochemical processes of PSII. PSII is a light-driven water:plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation; Belongs to the PsbB/PsbC family. PsbC subfamily. (473 aa)
psbZPhotosystem II reaction center protein Z; Controls the interaction of photosystem II (PSII) cores with the light-harvesting antenna; Belongs to the PsbZ family. (62 aa)
psaBPhotosystem I P700 chlorophyll a apoprotein A2; PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin. (734 aa)
psaAPhotosystem I P700 chlorophyll a apoprotein A1; PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin. (750 aa)
atpEATP synthase epsilon chain, chloroplastic; Produces ATP from ADP in the presence of a proton gradient across the membrane. (133 aa)
atpBATP synthase subunit beta, chloroplastic; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. (498 aa)
psaIPhotosystem I reaction center subunit VIII; May help in the organization of the PsaL subunit. Belongs to the PsaI family. (37 aa)
petACytochrome f; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (320 aa)
psbJPhotosystem II reaction center protein J; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. (40 aa)
psbLPhotosystem II reaction center protein L; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. This subunit is found at the monomer-monomer interface and is required for correct PSII assembly and/or dimerization. (38 aa)
psbFCytochrome b559 subunit beta; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. Belongs to the PsbE/PsbF family. (39 aa)
psbECytochrome b559 subunit alpha; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. Belongs to the PsbE/PsbF family. (83 aa)
petGCytochrome b6-f complex subunit 5; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. PetG is required for either the stability or assembly of the cytochrome b6-f complex. (37 aa)
psaJPhotosystem I reaction center subunit IX; May help in the organization of the PsaE and PsaF subunits. Belongs to the PsaJ family. (44 aa)
psbBPhotosystem II CP47 reaction center protein; One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light- induced photochemical processes of PSII. PSII is a light-driven water:plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation; Belongs to the PsbB/PsbC family. PsbB subfamily. (508 aa)
psbTPhotosystem II reaction center protein T; Seems to play a role in the dimerization of PSII. Belongs to the PsbT family. (35 aa)
psbHPhotosystem II reaction center protein H; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light- driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. (73 aa)
petBCytochrome b6; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (215 aa)
petDCytochrome b6-f complex subunit 4; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (165 aa)
psaCPhotosystem I iron-sulfur center; Apoprotein for the two 4Fe-4S centers FA and FB of photosystem I (PSI); essential for photochemical activity. FB is the terminal electron acceptor of PSI, donating electrons to ferredoxin. The C-terminus interacts with PsaA/B/D and helps assemble the protein into the PSI complex. Required for binding of PsaD and PsaE to PSI. PSI is a plastocyanin-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, [...] (81 aa)
A9PAP8_POPTRUncharacterized protein. (137 aa)
A9PE72_POPTRUncharacterized protein; Belongs to the ATPase B chain family. (220 aa)
A9PEJ0_POPTRFerredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (149 aa)
A9PEP9_POPTRUncharacterized protein. (134 aa)
A9PEV3_POPTRUncharacterized protein. (159 aa)
A9PEX3_POPTRCytochrome b6-f complex iron-sulfur subunit; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (228 aa)
A9PF82_POPTRUncharacterized protein. (234 aa)
A9PFE9_POPTRUncharacterized protein; Belongs to the ATPase B chain family. (220 aa)
A9PFK1_POPTRUncharacterized protein. (172 aa)
A9PFR3_POPTRUncharacterized protein. (234 aa)
A9PG34_POPTRPlastocyanin; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I. Belongs to the plastocyanin family. (168 aa)
A9PG57_POPTRUncharacterized protein. (144 aa)
A9PGA1_POPTRPsaL domain-containing protein. (216 aa)
A9PGC7_POPTRUncharacterized protein. (201 aa)
A9PGP9_POPTRPsbP domain-containing protein. (262 aa)
A9PGS6_POPTRUncharacterized protein. (332 aa)
A9PGV7_POPTRFerredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (155 aa)
A9PH06_POPTRFerredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (147 aa)
A9PH94_POPTRUncharacterized protein. (137 aa)
A9PHA9_POPTRUncharacterized protein. (331 aa)
A9PHM0_POPTRPsbP domain-containing protein. (262 aa)
A9PHN7_POPTRUncharacterized protein. (159 aa)
A9PHU8_POPTRUncharacterized protein. (137 aa)
A9PI20_POPTRUncharacterized protein. (224 aa)
A9PIG1_POPTRUncharacterized protein. (272 aa)
B9GG14_POPTRFerredoxin--NADP reductase, chloroplastic; Belongs to the ferredoxin--NADP reductase type 1 family. (378 aa)
B9GHJ1_POPTRFerredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (148 aa)
B9GRD0_POPTRPhotosystem II reaction center Psb28 protein; Belongs to the Psb28 family. (181 aa)
B9GS65_POPTRUncharacterized protein. (133 aa)
B9GT03_POPTRUncharacterized protein. (176 aa)
POPTR_T091100Uncharacterized protein. (375 aa)
B9H5C6_POPTRPlastocyanin; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I. Belongs to the plastocyanin family. (168 aa)
B9H851_POPTRUncharacterized protein. (175 aa)
B9HA54_POPTRUncharacterized protein. (130 aa)
B9HES1_POPTRUncharacterized protein. (172 aa)
B9HJW7_POPTRUncharacterized protein. (204 aa)
B9HJY4_POPTR2Fe-2S ferredoxin-type domain-containing protein. (144 aa)
B9HKP7_POPTRFerredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (155 aa)
B9HLC6_POPTRUncharacterized protein. (192 aa)
B9HQ08_POPTRFerredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (150 aa)
B9HQ34_POPTRUncharacterized protein. (149 aa)
B9HTF3_POPTRUncharacterized protein. (196 aa)
B9HTN3_POPTRPsbP domain-containing protein. (243 aa)
B9HV47_POPTRFerredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (144 aa)
B9HXY5_POPTRUncharacterized protein. (202 aa)
B9HZK6_POPTRUncharacterized protein. (370 aa)
B9I6H7_POPTRCytochrome b6-f complex iron-sulfur subunit; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (228 aa)
B9IQM7_POPTRUncharacterized protein. (252 aa)
B9MW43_POPTRUncharacterized protein. (250 aa)
B9MXF5_POPTRFerredoxin--NADP reductase, chloroplastic; Belongs to the ferredoxin--NADP reductase type 1 family. (363 aa)
B9MYU1_POPTRUncharacterized protein. (151 aa)
B9MYW6_POPTRFerredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (150 aa)
B9NAB2_POPTRUncharacterized protein. (141 aa)
U5G4Q2_POPTRFerredoxin--NADP reductase, chloroplastic; Belongs to the ferredoxin--NADP reductase type 1 family. (363 aa)
U5GIT4_POPTR2Fe-2S ferredoxin-type domain-containing protein. (191 aa)
U5GTX9_POPTRUncharacterized protein. (166 aa)
U5GUC7_POPTRUncharacterized protein. (236 aa)
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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