Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| rplI | rplS | Strop_4553 | Strop_1309 | LSU ribosomal protein L9P; Binds to the 23S rRNA. | LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.990 |
| rplI | rplU | Strop_4553 | Strop_3481 | LSU ribosomal protein L9P; Binds to the 23S rRNA. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.993 |
| rplI | rpmA | Strop_4553 | Strop_3480 | LSU ribosomal protein L9P; Binds to the 23S rRNA. | PFAM: ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.986 |
| rplI | rpsF | Strop_4553 | Strop_4556 | LSU ribosomal protein L9P; Binds to the 23S rRNA. | SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA. | 0.997 |
| rplI | rpsR | Strop_4553 | Strop_4554 | LSU ribosomal protein L9P; Binds to the 23S rRNA. | SSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.999 |
| rplS | rplI | Strop_1309 | Strop_4553 | LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | LSU ribosomal protein L9P; Binds to the 23S rRNA. | 0.990 |
| rplS | rplU | Strop_1309 | Strop_3481 | LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.995 |
| rplS | rpmA | Strop_1309 | Strop_3480 | LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | PFAM: ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.996 |
| rplS | rpsF | Strop_1309 | Strop_4556 | LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA. | 0.991 |
| rplS | rpsR | Strop_1309 | Strop_4554 | LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | SSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.990 |
| rplU | rplI | Strop_3481 | Strop_4553 | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | LSU ribosomal protein L9P; Binds to the 23S rRNA. | 0.993 |
| rplU | rplS | Strop_3481 | Strop_1309 | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.995 |
| rplU | rpmA | Strop_3481 | Strop_3480 | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | PFAM: ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.999 |
| rplU | rpsF | Strop_3481 | Strop_4556 | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA. | 0.991 |
| rplU | rpsR | Strop_3481 | Strop_4554 | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | SSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.989 |
| rpmA | rplI | Strop_3480 | Strop_4553 | PFAM: ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | LSU ribosomal protein L9P; Binds to the 23S rRNA. | 0.986 |
| rpmA | rplS | Strop_3480 | Strop_1309 | PFAM: ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.996 |
| rpmA | rplU | Strop_3480 | Strop_3481 | PFAM: ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.999 |
| rpmA | rpsF | Strop_3480 | Strop_4556 | PFAM: ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA. | 0.991 |
| rpmA | rpsR | Strop_3480 | Strop_4554 | PFAM: ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | SSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.991 |
page 1 of 2