(34 nodes) Mixed, incl. ABC-type maltose transporter activity, and Bacterial extracellular solute-binding protein network (Salinispora tropica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ABP52920.1	PFAM: ABC transporter related; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (453 aa)
	ABP53280.1	PFAM: extracellular solute-binding protein, family 1. (433 aa)
	ABP53281.1	PFAM: binding-protein-dependent transport systems inner membrane component. (337 aa)
	ABP53282.1	PFAM: binding-protein-dependent transport systems inner membrane component. (311 aa)
	ABP53655.1	Hypothetical protein. (410 aa)
	ABP53656.1	Transcriptional regulator, LacI family; PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator. (339 aa)
	ABP53657.1	PFAM: extracellular solute-binding protein, family 1. (426 aa)
	ABP53658.1	PFAM: binding-protein-dependent transport systems inner membrane component. (290 aa)
	ABP53659.1	PFAM: binding-protein-dependent transport systems inner membrane component. (304 aa)
	ABP53660.1	Glycoside hydrolase, family 85; PFAM: coagulation factor 5/8 type domain protein; glycoside hydrolase, family 85. (807 aa)
	ABP53661.1	PFAM: glycoside hydrolase, family 38; glycosyl hydrolase 38 domain protein. (1398 aa)
	ABP53662.1	Hypothetical protein. (241 aa)
	ABP54023.1	PFAM: extracellular solute-binding protein, family 1. (428 aa)
	ABP54024.1	PFAM: binding-protein-dependent transport systems inner membrane component. (322 aa)
	ABP54025.1	PFAM: binding-protein-dependent transport systems inner membrane component. (280 aa)
	ABP54848.1	PFAM: binding-protein-dependent transport systems inner membrane component. (289 aa)
	ABP54849.1	PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase. (351 aa)
	ABP54850.1	PFAM: extracellular solute-binding protein, family 1. (441 aa)
	ABP54851.1	PFAM: binding-protein-dependent transport systems inner membrane component. (286 aa)
	ABP55417.1	Hypothetical protein. (197 aa)
	ABP55418.1	PFAM: DNA-directed DNA polymerase. (592 aa)
	ABP55419.1	PFAM: binding-protein-dependent transport systems inner membrane component. (319 aa)
	ABP55420.1	PFAM: binding-protein-dependent transport systems inner membrane component. (313 aa)
	ABP55421.1	PFAM: extracellular solute-binding protein, family 1. (467 aa)
	ABP55422.1	Sugar isomerase (SIS); PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS). (319 aa)
	ABP55694.1	PFAM: PfkB domain protein. (320 aa)
	ABP55695.1	PFAM: N-acylglucosamine 2-epimerase. (425 aa)
	ABP55696.1	PFAM: binding-protein-dependent transport systems inner membrane component. (297 aa)
	ABP55697.1	PFAM: binding-protein-dependent transport systems inner membrane component. (298 aa)
	ABP55698.1	PFAM: extracellular solute-binding protein, family 1. (416 aa)
	ABP56018.1	PFAM: extracellular solute-binding protein, family 1. (447 aa)
	ABP56019.1	PFAM: binding-protein-dependent transport systems inner membrane component. (358 aa)
	ABP56020.1	PFAM: binding-protein-dependent transport systems inner membrane component. (317 aa)
	ABP56648.1	PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase. (363 aa)

Your Current Organism:

Salinispora tropica

NCBI taxonomy Id: 369723
Other names: S. tropica CNB-440, Salinispora sp. CNB-440, Salinispora tropica ATCC BAA-916, Salinispora tropica CNB-440, Salinispora tropica str. CNB-440, Salinispora tropica strain CNB-440

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABP52920.1	ABP53280.1	Strop_0435	Strop_0803	PFAM: ABC transporter related; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.	PFAM: extracellular solute-binding protein, family 1.	0.964
ABP52920.1	ABP53281.1	Strop_0435	Strop_0804	PFAM: ABC transporter related; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.	PFAM: binding-protein-dependent transport systems inner membrane component.	0.983
ABP52920.1	ABP53282.1	Strop_0435	Strop_0805	PFAM: ABC transporter related; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.	PFAM: binding-protein-dependent transport systems inner membrane component.	0.997
ABP52920.1	ABP53657.1	Strop_0435	Strop_1187	PFAM: ABC transporter related; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.	PFAM: extracellular solute-binding protein, family 1.	0.679
ABP52920.1	ABP53658.1	Strop_0435	Strop_1188	PFAM: ABC transporter related; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.	PFAM: binding-protein-dependent transport systems inner membrane component.	0.970
ABP52920.1	ABP53659.1	Strop_0435	Strop_1189	PFAM: ABC transporter related; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.	PFAM: binding-protein-dependent transport systems inner membrane component.	0.911
ABP52920.1	ABP54023.1	Strop_0435	Strop_1557	PFAM: ABC transporter related; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.	PFAM: extracellular solute-binding protein, family 1.	0.933
ABP52920.1	ABP54024.1	Strop_0435	Strop_1558	PFAM: ABC transporter related; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.	PFAM: binding-protein-dependent transport systems inner membrane component.	0.981
ABP52920.1	ABP54025.1	Strop_0435	Strop_1559	PFAM: ABC transporter related; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.	PFAM: binding-protein-dependent transport systems inner membrane component.	0.982
ABP52920.1	ABP54848.1	Strop_0435	Strop_2401	PFAM: ABC transporter related; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.	PFAM: binding-protein-dependent transport systems inner membrane component.	0.916
ABP52920.1	ABP54849.1	Strop_0435	Strop_2402	PFAM: ABC transporter related; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.	PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase.	0.912
ABP52920.1	ABP54850.1	Strop_0435	Strop_2403	PFAM: ABC transporter related; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.	PFAM: extracellular solute-binding protein, family 1.	0.723
ABP52920.1	ABP54851.1	Strop_0435	Strop_2404	PFAM: ABC transporter related; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.	PFAM: binding-protein-dependent transport systems inner membrane component.	0.915
ABP52920.1	ABP55419.1	Strop_0435	Strop_2981	PFAM: ABC transporter related; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.	PFAM: binding-protein-dependent transport systems inner membrane component.	0.916
ABP52920.1	ABP55420.1	Strop_0435	Strop_2982	PFAM: ABC transporter related; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.	PFAM: binding-protein-dependent transport systems inner membrane component.	0.976
ABP52920.1	ABP55421.1	Strop_0435	Strop_2983	PFAM: ABC transporter related; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.	PFAM: extracellular solute-binding protein, family 1.	0.596
ABP52920.1	ABP55696.1	Strop_0435	Strop_3262	PFAM: ABC transporter related; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.	PFAM: binding-protein-dependent transport systems inner membrane component.	0.969
ABP52920.1	ABP55697.1	Strop_0435	Strop_3263	PFAM: ABC transporter related; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.	PFAM: binding-protein-dependent transport systems inner membrane component.	0.978
ABP52920.1	ABP55698.1	Strop_0435	Strop_3264	PFAM: ABC transporter related; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.	PFAM: extracellular solute-binding protein, family 1.	0.915
ABP52920.1	ABP56018.1	Strop_0435	Strop_3587	PFAM: ABC transporter related; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.	PFAM: extracellular solute-binding protein, family 1.	0.919

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