STRINGSTRING
ABP54673.1 ABP54673.1 ABP54680.1 ABP54680.1 ABP54696.1 ABP54696.1 ABP55341.1 ABP55341.1 ABP52674.1 ABP52674.1 ABP54102.1 ABP54102.1 ABP54103.1 ABP54103.1 ABP54668.1 ABP54668.1 ABP54303.1 ABP54303.1 ABP54530.1 ABP54530.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ABP54673.1TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. (335 aa)
ABP54680.1Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. (290 aa)
ABP54696.1TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. (324 aa)
ABP55341.1Hypothetical protein. (104 aa)
ABP52674.1Hypothetical protein. (1435 aa)
ABP54102.1PFAM: UDP-galactopyranose mutase. (383 aa)
ABP54103.1PFAM: glycosyl transferase, family 2. (322 aa)
ABP54668.1PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related. (203 aa)
ABP54303.1PFAM: glycosyl transferase, family 2. (306 aa)
ABP54530.1PFAM: glycosyl transferase, family 2. (369 aa)
Your Current Organism:
Salinispora tropica
NCBI taxonomy Id: 369723
Other names: S. tropica CNB-440, Salinispora sp. CNB-440, Salinispora tropica ATCC BAA-916, Salinispora tropica CNB-440, Salinispora tropica str. CNB-440, Salinispora tropica strain CNB-440
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