STRINGSTRING
ABP52593.1 ABP52593.1 ABP53692.1 ABP53692.1 dxs dxs ABP54549.1 ABP54549.1 ABP54932.1 ABP54932.1 ABP55526.1 ABP55526.1 ABP55803.1 ABP55803.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ABP52593.1PFAM: Transketolase, central region; Transketolase domain protein. (329 aa)
ABP53692.1Transketolase domain protein; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (785 aa)
dxs1-Deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. (677 aa)
ABP54549.1PFAM: Transketolase, central region; Transketolase domain protein. (334 aa)
ABP54932.1Transketolase domain protein; PFAM: Transketolase, central region; Transketolase domain protein. (321 aa)
ABP55526.1TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase, central region; Belongs to the transketolase family. (741 aa)
ABP55803.1PFAM: dehydrogenase, E1 component; Transketolase, central region; Transketolase domain protein. (792 aa)
Your Current Organism:
Salinispora tropica
NCBI taxonomy Id: 369723
Other names: S. tropica CNB-440, Salinispora sp. CNB-440, Salinispora tropica ATCC BAA-916, Salinispora tropica CNB-440, Salinispora tropica str. CNB-440, Salinispora tropica strain CNB-440
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