STRINGSTRING
ABP52510.1 ABP52510.1 ABP52627.1 ABP52627.1 ABP53309.1 ABP53309.1 ABP53326.1 ABP53326.1 ABP53333.1 ABP53333.1 ABP53385.1 ABP53385.1 ABP54949.1 ABP54949.1 ABP54950.1 ABP54950.1 ABP55048.1 ABP55048.1 ABP55052.1 ABP55052.1 ABP55057.1 ABP55057.1 ABP55060.1 ABP55060.1 ABP55084.1 ABP55084.1 ABP55088.1 ABP55088.1 ABP55242.1 ABP55242.1 ABP55430.1 ABP55430.1 ABP55431.1 ABP55431.1 ABP55753.1 ABP55753.1 ABP55803.1 ABP55803.1 ABP55815.1 ABP55815.1 ABP56039.1 ABP56039.1 ABP56041.1 ABP56041.1 ABP56042.1 ABP56042.1 ABP56123.1 ABP56123.1 ackA ackA sucD sucD sucC sucC ABP56245.1 ABP56245.1 acsA acsA ABP56756.1 ABP56756.1 ABP56813.1 ABP56813.1 ABP56875.1 ABP56875.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ABP52510.1PFAM: phosphoribosylglycinamide synthetase; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein. (445 aa)
ABP52627.13-ketoacyl-CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (430 aa)
ABP53309.1TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase. (547 aa)
ABP53326.1Carbamoyl-phosphate synthase L chain, ATP-binding; PFAM: biotin/lipoyl attachment domain-containing protein; ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein. (583 aa)
ABP53333.1PFAM: carboxyl transferase. (527 aa)
ABP53385.1TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (420 aa)
ABP54949.1Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha / biotin carboxylase; PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein. (458 aa)
ABP54950.1acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (192 aa)
ABP55048.1PFAM: Enoyl-CoA hydratase/isomerase. (271 aa)
ABP55052.1TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (377 aa)
ABP55057.1TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (387 aa)
ABP55060.1PFAM: Enoyl-CoA hydratase/isomerase. (281 aa)
ABP55084.1PFAM: Enoyl-CoA hydratase/isomerase. (264 aa)
ABP55088.1Propanoyl-CoA C-acyltransferase. (391 aa)
ABP55242.1TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (383 aa)
ABP55430.1TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase. (496 aa)
ABP55431.1PFAM: aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (436 aa)
ABP55753.1TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase. (481 aa)
ABP55803.1PFAM: dehydrogenase, E1 component; Transketolase, central region; Transketolase domain protein. (792 aa)
ABP55815.1Propionyl-CoA carboxylase; PFAM: carboxyl transferase. (474 aa)
ABP56039.1TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase. (562 aa)
ABP56041.1TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (399 aa)
ABP56042.1methylmalonyl-CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase. (157 aa)
ABP56123.1Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. (691 aa)
ackAAcetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (371 aa)
sucDsuccinyl-CoA synthetase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (295 aa)
sucCsuccinyl-CoA synthetase (ADP-forming) beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (392 aa)
ABP56245.1PFAM: cobalamin B12-binding domain protein. (134 aa)
acsAAcetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. (715 aa)
ABP56756.1Carbamoyl-phosphate synthase L chain, ATP-binding; PFAM: biotin/lipoyl attachment domain-containing protein; protein of unknown function DUF201; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; D-alanine--D-alanine ligase domain protein. (674 aa)
ABP56813.1PFAM: MmgE/PrpD family protein. (521 aa)
ABP56875.1Hypothetical protein; Belongs to the enoyl-CoA hydratase/isomerase family. (253 aa)
Your Current Organism:
Salinispora tropica
NCBI taxonomy Id: 369723
Other names: S. tropica CNB-440, Salinispora sp. CNB-440, Salinispora tropica ATCC BAA-916, Salinispora tropica CNB-440, Salinispora tropica str. CNB-440, Salinispora tropica strain CNB-440
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