STRINGSTRING
ino80b ino80b tfpt tfpt ino80c ino80c LOC108236794 LOC108236794 LOC108233107 LOC108233107 LOC108244554 LOC108244554 ino80e ino80e actr8 actr8 actr5 actr5 ercc6l2 ercc6l2 ruvbl2 ruvbl2 ino80d ino80d mcrs1 mcrs1 ino80 ino80 ruvbl1 ruvbl1 actl6a actl6a nfrkb nfrkb
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ino80bINO80 complex subunit B. (335 aa)
tfptTCF3 (E2A) fusion partner. (197 aa)
ino80cINO80 complex subunit C. (207 aa)
LOC108236794YY1 transcription factor. (346 aa)
LOC108233107Keratin 5; Belongs to the intermediate filament family. (533 aa)
LOC108244554Uncharacterized protein. (375 aa)
ino80eINO80 complex subunit E. (250 aa)
actr8Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. (643 aa)
actr5Actin related protein 5; Belongs to the actin family. (642 aa)
ercc6l2Excision repair cross-complementation group 6-like 2. (1533 aa)
ruvbl2RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (459 aa)
ino80dINO80 complex subunit Da. (1000 aa)
mcrs1Microspherule protein 1. (466 aa)
ino80INO80 complex ATPase subunit. (1474 aa)
ruvbl1RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (456 aa)
actl6aActin-like 6A; Belongs to the actin family. (429 aa)
nfrkbNuclear factor related to kappaB binding protein. (1278 aa)
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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