21 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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Known Interactions

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Predicted Interactions

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Your Input:
	gtf2e2	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (287 aa)
	gtf2f1	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (530 aa)
	LOC108240442	General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (261 aa)
	gtf2h4	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (463 aa)
	polr2i	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
	gtf2b	General transcription factor IIB. (224 aa)
	gtf2a1	General transcription factor IIA, 1. (385 aa)
	ccnh	Cyclin H; Belongs to the cyclin family. (333 aa)
	mnat1	CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (311 aa)
	gtf2h5	General transcription factor IIH, polypeptide 5. (71 aa)
	gtf2a2	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (109 aa)
	cdk7	Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. (343 aa)
	gtf2e1	General transcription factor IIE, polypeptide 1, alpha. (446 aa)
	gtf2h3	General transcription factor IIH, polypeptide 3. (299 aa)
	tbp	TATA box binding protein. (304 aa)
	gtf2h1	General transcription factor IIH, polypeptide 1. (409 aa)
	ENSKMAP00000028503	PH_TFIIH domain-containing protein. (131 aa)
	ercc2	Excision repair cross-complementation group 2. (760 aa)
	gtf2f2	General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (268 aa)
	ercc3	Excision repair cross-complementation group 3. (783 aa)
	LOC108232507	General transcription factor IIH subunit. (392 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSKMAP00000028503	LOC108232507	ENSKMAP00000028503	ENSKMAP00000029528	PH_TFIIH domain-containing protein.	General transcription factor IIH subunit.	0.980
ENSKMAP00000028503	LOC108240442	ENSKMAP00000028503	ENSKMAP00000001506	PH_TFIIH domain-containing protein.	General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity.	0.872
ENSKMAP00000028503	ccnh	ENSKMAP00000028503	ENSKMAP00000006920	PH_TFIIH domain-containing protein.	Cyclin H; Belongs to the cyclin family.	0.968
ENSKMAP00000028503	cdk7	ENSKMAP00000028503	ENSKMAP00000017456	PH_TFIIH domain-containing protein.	Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily.	0.841
ENSKMAP00000028503	ercc2	ENSKMAP00000028503	ENSKMAP00000028774	PH_TFIIH domain-containing protein.	Excision repair cross-complementation group 2.	0.970
ENSKMAP00000028503	ercc3	ENSKMAP00000028503	ENSKMAP00000029380	PH_TFIIH domain-containing protein.	Excision repair cross-complementation group 3.	0.971
ENSKMAP00000028503	gtf2a1	ENSKMAP00000028503	ENSKMAP00000004680	PH_TFIIH domain-containing protein.	General transcription factor IIA, 1.	0.859
ENSKMAP00000028503	gtf2a2	ENSKMAP00000028503	ENSKMAP00000014646	PH_TFIIH domain-containing protein.	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	0.930
ENSKMAP00000028503	gtf2b	ENSKMAP00000028503	ENSKMAP00000003261	PH_TFIIH domain-containing protein.	General transcription factor IIB.	0.940
ENSKMAP00000028503	gtf2e1	ENSKMAP00000028503	ENSKMAP00000020856	PH_TFIIH domain-containing protein.	General transcription factor IIE, polypeptide 1, alpha.	0.967
ENSKMAP00000028503	gtf2e2	ENSKMAP00000028503	ENSKMAP00000000406	PH_TFIIH domain-containing protein.	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	0.938
ENSKMAP00000028503	gtf2f1	ENSKMAP00000028503	ENSKMAP00000001405	PH_TFIIH domain-containing protein.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.946
ENSKMAP00000028503	gtf2f2	ENSKMAP00000028503	ENSKMAP00000029353	PH_TFIIH domain-containing protein.	General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity.	0.872
ENSKMAP00000028503	gtf2h1	ENSKMAP00000028503	ENSKMAP00000028496	PH_TFIIH domain-containing protein.	General transcription factor IIH, polypeptide 1.	0.965
ENSKMAP00000028503	gtf2h3	ENSKMAP00000028503	ENSKMAP00000026350	PH_TFIIH domain-containing protein.	General transcription factor IIH, polypeptide 3.	0.980
ENSKMAP00000028503	gtf2h4	ENSKMAP00000028503	ENSKMAP00000001923	PH_TFIIH domain-containing protein.	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.980
ENSKMAP00000028503	gtf2h5	ENSKMAP00000028503	ENSKMAP00000011911	PH_TFIIH domain-containing protein.	General transcription factor IIH, polypeptide 5.	0.690
ENSKMAP00000028503	mnat1	ENSKMAP00000028503	ENSKMAP00000007944	PH_TFIIH domain-containing protein.	CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex.	0.968
ENSKMAP00000028503	polr2i	ENSKMAP00000028503	ENSKMAP00000002043	PH_TFIIH domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.914
ENSKMAP00000028503	tbp	ENSKMAP00000028503	ENSKMAP00000027430	PH_TFIIH domain-containing protein.	TATA box binding protein.	0.821