STRINGSTRING
nat10 nat10 LOC108250319 LOC108250319 utp4 utp4 utp15 utp15 nol6 nol6 utp20 utp20 Heatr1 Heatr1 wdr43 wdr43 utp18 utp18 wdr36 wdr36 wdr3 wdr3 wdr75 wdr75 tbl3 tbl3 bysl bysl utp6 utp6 bms1 bms1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
nat10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1037 aa)
LOC108250319PWP2 small subunit processome component. (909 aa)
utp4UTP4 small subunit processome component. (688 aa)
utp15UTP15 small subunit processome component. (529 aa)
nol6Nucleolar protein 6. (1150 aa)
utp20UTP20 small subunit processome component. (2613 aa)
Heatr1BP28CT domain-containing protein. (356 aa)
wdr43WD repeat domain 43. (652 aa)
utp18WD_REPEATS_REGION domain-containing protein. (533 aa)
wdr36WD repeat domain 36. (670 aa)
wdr3WD repeat domain 3. (931 aa)
wdr75WD repeat domain 75. (848 aa)
tbl3Transducin (beta)-like 3. (898 aa)
byslBystin-like. (439 aa)
utp6UTP6 small subunit processome component. (595 aa)
bms1BMS1 ribosome biogenesis factor. (791 aa)
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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