16 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	nat10	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1037 aa)
	LOC108250319	PWP2 small subunit processome component. (909 aa)
	utp4	UTP4 small subunit processome component. (688 aa)
	utp15	UTP15 small subunit processome component. (529 aa)
	nol6	Nucleolar protein 6. (1150 aa)
	utp20	UTP20 small subunit processome component. (2613 aa)
	Heatr1	BP28CT domain-containing protein. (356 aa)
	wdr43	WD repeat domain 43. (652 aa)
	utp18	WD_REPEATS_REGION domain-containing protein. (533 aa)
	wdr36	WD repeat domain 36. (670 aa)
	wdr3	WD repeat domain 3. (931 aa)
	wdr75	WD repeat domain 75. (848 aa)
	tbl3	Transducin (beta)-like 3. (898 aa)
	bysl	Bystin-like. (439 aa)
	utp6	UTP6 small subunit processome component. (595 aa)
	bms1	BMS1 ribosome biogenesis factor. (791 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Heatr1	LOC108250319	ENSKMAP00000011271	ENSKMAP00000004184	BP28CT domain-containing protein.	PWP2 small subunit processome component.	0.999
Heatr1	bms1	ENSKMAP00000011271	ENSKMAP00000029707	BP28CT domain-containing protein.	BMS1 ribosome biogenesis factor.	0.999
Heatr1	bysl	ENSKMAP00000011271	ENSKMAP00000028918	BP28CT domain-containing protein.	Bystin-like.	0.996
Heatr1	nat10	ENSKMAP00000011271	ENSKMAP00000001900	BP28CT domain-containing protein.	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	0.996
Heatr1	nol6	ENSKMAP00000011271	ENSKMAP00000006346	BP28CT domain-containing protein.	Nucleolar protein 6.	0.999
Heatr1	tbl3	ENSKMAP00000011271	ENSKMAP00000027162	BP28CT domain-containing protein.	Transducin (beta)-like 3.	0.999
Heatr1	utp15	ENSKMAP00000011271	ENSKMAP00000006218	BP28CT domain-containing protein.	UTP15 small subunit processome component.	0.999
Heatr1	utp18	ENSKMAP00000011271	ENSKMAP00000018640	BP28CT domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.999
Heatr1	utp20	ENSKMAP00000011271	ENSKMAP00000008092	BP28CT domain-containing protein.	UTP20 small subunit processome component.	0.999
Heatr1	utp4	ENSKMAP00000011271	ENSKMAP00000004705	BP28CT domain-containing protein.	UTP4 small subunit processome component.	0.999
Heatr1	utp6	ENSKMAP00000011271	ENSKMAP00000029179	BP28CT domain-containing protein.	UTP6 small subunit processome component.	0.999
Heatr1	wdr3	ENSKMAP00000011271	ENSKMAP00000021580	BP28CT domain-containing protein.	WD repeat domain 3.	0.999
Heatr1	wdr36	ENSKMAP00000011271	ENSKMAP00000020644	BP28CT domain-containing protein.	WD repeat domain 36.	0.999
Heatr1	wdr43	ENSKMAP00000011271	ENSKMAP00000012381	BP28CT domain-containing protein.	WD repeat domain 43.	0.999
Heatr1	wdr75	ENSKMAP00000011271	ENSKMAP00000021727	BP28CT domain-containing protein.	WD repeat domain 75.	0.999
LOC108250319	Heatr1	ENSKMAP00000004184	ENSKMAP00000011271	PWP2 small subunit processome component.	BP28CT domain-containing protein.	0.999
LOC108250319	bms1	ENSKMAP00000004184	ENSKMAP00000029707	PWP2 small subunit processome component.	BMS1 ribosome biogenesis factor.	0.999
LOC108250319	bysl	ENSKMAP00000004184	ENSKMAP00000028918	PWP2 small subunit processome component.	Bystin-like.	0.999
LOC108250319	nat10	ENSKMAP00000004184	ENSKMAP00000001900	PWP2 small subunit processome component.	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	0.999
LOC108250319	nol6	ENSKMAP00000004184	ENSKMAP00000006346	PWP2 small subunit processome component.	Nucleolar protein 6.	0.999