25 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	tm7sf3	Transmembrane 7 superfamily member 3. (453 aa)
	LOC108244734	Rho-GAP domain-containing protein. (920 aa)
	larp6	La ribonucleoprotein domain family, member 6a. (718 aa)
	ENSKMAP00000003645	Geminin coiled-coil domain containing. (290 aa)
	fam13a	Family with sequence similarity 13 member A. (1073 aa)
	rfx4	Regulatory factor X, 4. (721 aa)
	rfxank	Regulatory factor X-associated ankyrin-containing protein. (226 aa)
	rfxap	Regulatory factor X-associated protein. (215 aa)
	LOC108237144	Forkhead box J1b. (487 aa)
	RFX7	Regulatory factor X7. (1226 aa)
	rfx3	Regulatory factor X, 3 (influences HLA class II expression). (759 aa)
	cunh7orf25	Zgc:55781. (418 aa)
	rfx2	Regulatory factor X, 2 (influences HLA class II expression). (731 aa)
	hmx3	H6 family homeobox 3. (288 aa)
	LOC108229221	Fork-head domain-containing protein. (456 aa)
	sgsm1	Small G protein signaling modulator 1a. (1112 aa)
	Ciita	NACHT domain-containing protein. (925 aa)
	ankra2	Ankyrin repeat, family A (RFXANK-like), 2. (316 aa)
	rfx1	Regulatory factor X, 1b (influences HLA class II expression). (845 aa)
	ENSKMAP00000027050	Uncharacterized protein. (118 aa)
	Mtcl1	Microtubule crosslinking factor 1. (498 aa)
	dpcd	Deleted in primary ciliary dyskinesia homolog (mouse). (202 aa)
	LOC108239327	Regulatory factor X, 1a (influences HLA class II expression). (912 aa)
	LOC108230042	Regulatory factor X7b. (1473 aa)
	rfx5	Regulatory factor X, 5. (695 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Ciita	rfx5	ENSKMAP00000024341	ENSKMAP00000029811	NACHT domain-containing protein.	Regulatory factor X, 5.	0.850
Ciita	rfxank	ENSKMAP00000024341	ENSKMAP00000007051	NACHT domain-containing protein.	Regulatory factor X-associated ankyrin-containing protein.	0.753
Ciita	rfxap	ENSKMAP00000024341	ENSKMAP00000007107	NACHT domain-containing protein.	Regulatory factor X-associated protein.	0.679
ENSKMAP00000003645	LOC108237144	ENSKMAP00000003645	ENSKMAP00000008981	Geminin coiled-coil domain containing.	Forkhead box J1b.	0.635
ENSKMAP00000003645	larp6	ENSKMAP00000003645	ENSKMAP00000002192	Geminin coiled-coil domain containing.	La ribonucleoprotein domain family, member 6a.	0.630
ENSKMAP00000003645	rfx2	ENSKMAP00000003645	ENSKMAP00000018211	Geminin coiled-coil domain containing.	Regulatory factor X, 2 (influences HLA class II expression).	0.406
ENSKMAP00000003645	rfx4	ENSKMAP00000003645	ENSKMAP00000006931	Geminin coiled-coil domain containing.	Regulatory factor X, 4.	0.491
LOC108229221	dpcd	ENSKMAP00000020602	ENSKMAP00000028295	Fork-head domain-containing protein.	Deleted in primary ciliary dyskinesia homolog (mouse).	0.518
LOC108229221	rfx2	ENSKMAP00000020602	ENSKMAP00000018211	Fork-head domain-containing protein.	Regulatory factor X, 2 (influences HLA class II expression).	0.514
LOC108229221	rfx3	ENSKMAP00000020602	ENSKMAP00000013282	Fork-head domain-containing protein.	Regulatory factor X, 3 (influences HLA class II expression).	0.508
LOC108230042	rfxank	ENSKMAP00000029408	ENSKMAP00000007051	Regulatory factor X7b.	Regulatory factor X-associated ankyrin-containing protein.	0.598
LOC108230042	rfxap	ENSKMAP00000029408	ENSKMAP00000007107	Regulatory factor X7b.	Regulatory factor X-associated protein.	0.652
LOC108230042	tm7sf3	ENSKMAP00000029408	ENSKMAP00000000172	Regulatory factor X7b.	Transmembrane 7 superfamily member 3.	0.577
LOC108237144	ENSKMAP00000003645	ENSKMAP00000008981	ENSKMAP00000003645	Forkhead box J1b.	Geminin coiled-coil domain containing.	0.635
LOC108237144	rfx2	ENSKMAP00000008981	ENSKMAP00000018211	Forkhead box J1b.	Regulatory factor X, 2 (influences HLA class II expression).	0.660
LOC108237144	rfx3	ENSKMAP00000008981	ENSKMAP00000013282	Forkhead box J1b.	Regulatory factor X, 3 (influences HLA class II expression).	0.451
LOC108239327	rfxank	ENSKMAP00000028641	ENSKMAP00000007051	Regulatory factor X, 1a (influences HLA class II expression).	Regulatory factor X-associated ankyrin-containing protein.	0.400
LOC108239327	rfxap	ENSKMAP00000028641	ENSKMAP00000007107	Regulatory factor X, 1a (influences HLA class II expression).	Regulatory factor X-associated protein.	0.481
RFX7	ankra2	ENSKMAP00000011057	ENSKMAP00000024854	Regulatory factor X7.	Ankyrin repeat, family A (RFXANK-like), 2.	0.890
RFX7	larp6	ENSKMAP00000011057	ENSKMAP00000002192	Regulatory factor X7.	La ribonucleoprotein domain family, member 6a.	0.403