STRINGSTRING
LOC108236908 LOC108236908 RCBTB1 RCBTB1 mycbp2 mycbp2 lrrc39 lrrc39 ENSKMAP00000005957 ENSKMAP00000005957 rcbtb2 rcbtb2 Plekha3 Plekha3 LOC108244139 LOC108244139 cdadc1 cdadc1 LOC108232129 LOC108232129 MAP3K12 MAP3K12 fbxo45 fbxo45 gpalpp1 gpalpp1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC108236908Multidrug and toxin extrusion protein; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family. (648 aa)
RCBTB1RCC1 and BTB domain containing protein 1. (531 aa)
mycbp2MYC binding protein 2. (4580 aa)
lrrc39Uncharacterized protein. (118 aa)
ENSKMAP00000005957Motilin receptor; Belongs to the G-protein coupled receptor 1 family. (278 aa)
rcbtb2Regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2. (527 aa)
Plekha3PH domain-containing protein. (62 aa)
LOC108244139Regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1. (531 aa)
cdadc1Cytidine and dCMP deaminase domain containing 1. (565 aa)
LOC108232129Mitogen-activated protein kinase kinase kinase 12; May be an activator of the JNK/SAPK pathway. (962 aa)
MAP3K12Mitogen-activated protein kinase kinase kinase 12; May be an activator of the JNK/SAPK pathway. (949 aa)
fbxo45F-box protein 45. (287 aa)
gpalpp1GPALPP motifs containing 1. (333 aa)
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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