STRINGSTRING
rfc1 rfc1 rev1 rev1 rfc5 rfc5 pold2 pold2 pcna pcna LOC108244487 LOC108244487 chtf8 chtf8 mad2l2 mad2l2 fen1 fen1 rfc3 rfc3 chtf18 chtf18 pold4 pold4 poli poli rfc2 rfc2 pold1 pold1 rfc4 rfc4 polk polk rev3l rev3l pold3 pold3 lig1 lig1 rad17 rad17 dscc1 dscc1 polh polh atad5 atad5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rfc1Replication factor C subunit 1. (1180 aa)
rev1REV1 DNA directed polymerase. (1363 aa)
rfc5Replication factor C (activator 1) 5. (339 aa)
pold2Polymerase (DNA directed), delta 2, regulatory subunit. (471 aa)
pcnaProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
LOC108244487Zgc:110269. (346 aa)
chtf8CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae). (136 aa)
mad2l2Mitotic arrest deficient 2 like 2. (210 aa)
fen1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (380 aa)
rfc3Replication factor C (activator 1) 3. (356 aa)
chtf18CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae). (775 aa)
pold4Uncharacterized protein. (110 aa)
poliPolymerase (DNA directed) iota. (716 aa)
rfc2Replication factor C (activator 1) 2. (357 aa)
pold1DNA polymerase. (1105 aa)
rfc4Replication factor C (activator 1) 4. (388 aa)
polkPolymerase (DNA directed) kappa. (401 aa)
rev3lREV3 like, DNA directed polymerase zeta catalytic subunit. (2448 aa)
pold3Polymerase (DNA-directed), delta 3, accessory subunit. (440 aa)
lig1DNA ligase. (1010 aa)
rad17RAD17 checkpoint clamp loader component. (528 aa)
dscc1DNA replication and sister chromatid cohesion 1. (390 aa)
polhPolymerase (DNA directed), eta. (738 aa)
atad5ATPase family AAA domain containing 5a. (1804 aa)
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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