7 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	xpc	Xeroderma pigmentosum, complementation group C. (935 aa)
	LOC108240516	Centrin, EF-hand protein, 2. (177 aa)
	RAD23B	RAD23 homolog B, nucleotide excision repair protein. (396 aa)
	bivm	Basic, immunoglobulin-like variable motif containing. (481 aa)
	ercc6	Excision repair cross-complementation group 6. (1442 aa)
	xpa	Xeroderma pigmentosum, complementation group A. (275 aa)
	ercc5	Excision repair cross-complementation group 5. (1028 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC108240516	RAD23B	ENSKMAP00000009918	ENSKMAP00000020553	Centrin, EF-hand protein, 2.	RAD23 homolog B, nucleotide excision repair protein.	0.734
LOC108240516	bivm	ENSKMAP00000009918	ENSKMAP00000020665	Centrin, EF-hand protein, 2.	Basic, immunoglobulin-like variable motif containing.	0.519
LOC108240516	ercc5	ENSKMAP00000009918	ENSKMAP00000029766	Centrin, EF-hand protein, 2.	Excision repair cross-complementation group 5.	0.519
LOC108240516	xpa	ENSKMAP00000009918	ENSKMAP00000028000	Centrin, EF-hand protein, 2.	Xeroderma pigmentosum, complementation group A.	0.634
LOC108240516	xpc	ENSKMAP00000009918	ENSKMAP00000003546	Centrin, EF-hand protein, 2.	Xeroderma pigmentosum, complementation group C.	0.942
RAD23B	LOC108240516	ENSKMAP00000020553	ENSKMAP00000009918	RAD23 homolog B, nucleotide excision repair protein.	Centrin, EF-hand protein, 2.	0.734
RAD23B	bivm	ENSKMAP00000020553	ENSKMAP00000020665	RAD23 homolog B, nucleotide excision repair protein.	Basic, immunoglobulin-like variable motif containing.	0.647
RAD23B	ercc5	ENSKMAP00000020553	ENSKMAP00000029766	RAD23 homolog B, nucleotide excision repair protein.	Excision repair cross-complementation group 5.	0.647
RAD23B	ercc6	ENSKMAP00000020553	ENSKMAP00000027213	RAD23 homolog B, nucleotide excision repair protein.	Excision repair cross-complementation group 6.	0.649
RAD23B	xpa	ENSKMAP00000020553	ENSKMAP00000028000	RAD23 homolog B, nucleotide excision repair protein.	Xeroderma pigmentosum, complementation group A.	0.860
RAD23B	xpc	ENSKMAP00000020553	ENSKMAP00000003546	RAD23 homolog B, nucleotide excision repair protein.	Xeroderma pigmentosum, complementation group C.	0.971
bivm	LOC108240516	ENSKMAP00000020665	ENSKMAP00000009918	Basic, immunoglobulin-like variable motif containing.	Centrin, EF-hand protein, 2.	0.519
bivm	RAD23B	ENSKMAP00000020665	ENSKMAP00000020553	Basic, immunoglobulin-like variable motif containing.	RAD23 homolog B, nucleotide excision repair protein.	0.647
bivm	ercc5	ENSKMAP00000020665	ENSKMAP00000029766	Basic, immunoglobulin-like variable motif containing.	Excision repair cross-complementation group 5.	0.880
bivm	ercc6	ENSKMAP00000020665	ENSKMAP00000027213	Basic, immunoglobulin-like variable motif containing.	Excision repair cross-complementation group 6.	0.947
bivm	xpa	ENSKMAP00000020665	ENSKMAP00000028000	Basic, immunoglobulin-like variable motif containing.	Xeroderma pigmentosum, complementation group A.	0.829
bivm	xpc	ENSKMAP00000020665	ENSKMAP00000003546	Basic, immunoglobulin-like variable motif containing.	Xeroderma pigmentosum, complementation group C.	0.809
ercc5	LOC108240516	ENSKMAP00000029766	ENSKMAP00000009918	Excision repair cross-complementation group 5.	Centrin, EF-hand protein, 2.	0.519
ercc5	RAD23B	ENSKMAP00000029766	ENSKMAP00000020553	Excision repair cross-complementation group 5.	RAD23 homolog B, nucleotide excision repair protein.	0.647
ercc5	bivm	ENSKMAP00000029766	ENSKMAP00000020665	Excision repair cross-complementation group 5.	Basic, immunoglobulin-like variable motif containing.	0.880