STRINGSTRING
cul4b cul4b cops3 cops3 ddb1 ddb1 cops2 cops2 cops8 cops8 cops5 cops5 ppp1r42 ppp1r42 cops7a cops7a cops4 cops4 ercc8 ercc8 dcaf10 dcaf10 dcaf5 dcaf5 gps1 gps1 dtl dtl dcaf11 dcaf11 COPS6 COPS6 dcaf4 dcaf4 ddb2 ddb2 wdtc1 wdtc1 dcaf8 dcaf8 LOC108229807 LOC108229807 dcaf6 dcaf6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cul4bCullin 4B; Belongs to the cullin family. (869 aa)
cops3COP9 signalosome subunit 3. (423 aa)
ddb1Damage-specific DNA binding protein 1. (1075 aa)
cops2COP9 signalosome subunit 2. (443 aa)
cops8COP9 signalosome subunit 8. (191 aa)
cops5COP9 signalosome subunit 5. (334 aa)
ppp1r42Protein phosphatase 1, regulatory subunit 42. (283 aa)
cops7aCOP9 constitutive photomorphogenic homolog subunit 7A. (268 aa)
cops4COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis). (406 aa)
ercc8Excision repair cross-complementation group 8. (401 aa)
dcaf10WD repeat domain 32. (516 aa)
dcaf5Ddb1 and cul4 associated factor 5. (745 aa)
gps1G protein pathway suppressor 1. (487 aa)
dtlDenticleless E3 ubiquitin protein ligase homolog (Drosophila). (621 aa)
dcaf11DDB1- and CUL4-associated factor 11; May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex; Belongs to the WD repeat LEC14B family. (542 aa)
COPS6COP9 signalosome subunit 6. (316 aa)
dcaf4WD repeat domain 21. (503 aa)
ddb2Damage-specific DNA binding protein 2. (497 aa)
wdtc1WD and tetratricopeptide repeats 1. (670 aa)
dcaf8DDB1 and CUL4 associated factor 8. (613 aa)
LOC108229807Cullin 4A; Belongs to the cullin family. (746 aa)
dcaf6Ddb1 and cul4 associated factor 6. (975 aa)
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.