STRINGSTRING
cul4b cul4b ddb1 ddb1 ercc8 ercc8 dtl dtl ddb2 ddb2 LOC108229807 LOC108229807
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cul4bCullin 4B; Belongs to the cullin family. (869 aa)
ddb1Damage-specific DNA binding protein 1. (1075 aa)
ercc8Excision repair cross-complementation group 8. (401 aa)
dtlDenticleless E3 ubiquitin protein ligase homolog (Drosophila). (621 aa)
ddb2Damage-specific DNA binding protein 2. (497 aa)
LOC108229807Cullin 4A; Belongs to the cullin family. (746 aa)
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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