5 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	blm	BLM RecQ like helicase. (1384 aa)
	recql4	RecQ helicase-like 4. (1281 aa)
	LOC108236679	Nei-like DNA glycosylase 3. (556 aa)
	bivm	Basic, immunoglobulin-like variable motif containing. (481 aa)
	ercc5	Excision repair cross-complementation group 5. (1028 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC108236679	bivm	ENSKMAP00000013215	ENSKMAP00000020665	Nei-like DNA glycosylase 3.	Basic, immunoglobulin-like variable motif containing.	0.620
LOC108236679	blm	ENSKMAP00000013215	ENSKMAP00000022385	Nei-like DNA glycosylase 3.	BLM RecQ like helicase.	0.509
LOC108236679	ercc5	ENSKMAP00000013215	ENSKMAP00000029766	Nei-like DNA glycosylase 3.	Excision repair cross-complementation group 5.	0.620
LOC108236679	recql4	ENSKMAP00000013215	ENSKMAP00000012780	Nei-like DNA glycosylase 3.	RecQ helicase-like 4.	0.491
bivm	LOC108236679	ENSKMAP00000020665	ENSKMAP00000013215	Basic, immunoglobulin-like variable motif containing.	Nei-like DNA glycosylase 3.	0.620
bivm	blm	ENSKMAP00000020665	ENSKMAP00000022385	Basic, immunoglobulin-like variable motif containing.	BLM RecQ like helicase.	0.779
bivm	ercc5	ENSKMAP00000020665	ENSKMAP00000029766	Basic, immunoglobulin-like variable motif containing.	Excision repair cross-complementation group 5.	0.880
bivm	recql4	ENSKMAP00000020665	ENSKMAP00000012780	Basic, immunoglobulin-like variable motif containing.	RecQ helicase-like 4.	0.779
blm	LOC108236679	ENSKMAP00000022385	ENSKMAP00000013215	BLM RecQ like helicase.	Nei-like DNA glycosylase 3.	0.509
blm	bivm	ENSKMAP00000022385	ENSKMAP00000020665	BLM RecQ like helicase.	Basic, immunoglobulin-like variable motif containing.	0.779
blm	ercc5	ENSKMAP00000022385	ENSKMAP00000029766	BLM RecQ like helicase.	Excision repair cross-complementation group 5.	0.779
ercc5	LOC108236679	ENSKMAP00000029766	ENSKMAP00000013215	Excision repair cross-complementation group 5.	Nei-like DNA glycosylase 3.	0.620
ercc5	bivm	ENSKMAP00000029766	ENSKMAP00000020665	Excision repair cross-complementation group 5.	Basic, immunoglobulin-like variable motif containing.	0.880
ercc5	blm	ENSKMAP00000029766	ENSKMAP00000022385	Excision repair cross-complementation group 5.	BLM RecQ like helicase.	0.779
ercc5	recql4	ENSKMAP00000029766	ENSKMAP00000012780	Excision repair cross-complementation group 5.	RecQ helicase-like 4.	0.779
recql4	LOC108236679	ENSKMAP00000012780	ENSKMAP00000013215	RecQ helicase-like 4.	Nei-like DNA glycosylase 3.	0.491
recql4	bivm	ENSKMAP00000012780	ENSKMAP00000020665	RecQ helicase-like 4.	Basic, immunoglobulin-like variable motif containing.	0.779
recql4	ercc5	ENSKMAP00000012780	ENSKMAP00000029766	RecQ helicase-like 4.	Excision repair cross-complementation group 5.	0.779