25 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SMAD4	Mothers against decapentaplegic homolog. (457 aa)
	LOC108236460	Vestigial like 4 like. (269 aa)
	LOC108234834	Uncharacterized protein. (1019 aa)
	LOC108246840	Uncharacterized protein. (739 aa)
	LOC108228750	Uncharacterized protein. (332 aa)
	LOC108247437	Androgen receptor. (742 aa)
	LOC108250440	E1A binding protein p300 a. (2399 aa)
	LOC108241221	GATA binding protein 2a. (458 aa)
	LOC108235002	Citron rho-interacting serine/threonine kinase b. (1632 aa)
	ppard	Peroxisome proliferator-activated receptor delta b. (509 aa)
	Med25	Mediator complex subunit 25. (248 aa)
	ENSKMAP00000011385	Med25 domain-containing protein. (149 aa)
	zbtb49	Zinc finger and BTB domain containing 49. (784 aa)
	LOC108247541	Mothers against decapentaplegic homolog. (503 aa)
	vgll4	Vestigial-like family member 4b. (313 aa)
	LOC108228999	Mothers against decapentaplegic homolog. (553 aa)
	LOC108231923	Vestigial-like family member 4a. (261 aa)
	LOC108247643	CREB binding protein b. (2428 aa)
	ep300	E1A binding protein p300 b. (2785 aa)
	LOC108237972	Uncharacterized protein. (666 aa)
	med1	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1802 aa)
	LOC108241482	CREB binding protein a. (2490 aa)
	GATA2	Uncharacterized protein. (467 aa)
	LOC108239854	Citron Rho-interacting kinase; Plays a role in cytokinesis. Displays serine/threonine protein kinase activity; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (2027 aa)
	LOC108244378	GATA binding protein 1a. (426 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSKMAP00000011385	Med25	ENSKMAP00000011385	ENSKMAP00000011354	Med25 domain-containing protein.	Mediator complex subunit 25.	0.932
ENSKMAP00000011385	med1	ENSKMAP00000011385	ENSKMAP00000023121	Med25 domain-containing protein.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.934
GATA2	LOC108241482	ENSKMAP00000026926	ENSKMAP00000026436	Uncharacterized protein.	CREB binding protein a.	0.557
GATA2	LOC108247643	ENSKMAP00000026926	ENSKMAP00000019200	Uncharacterized protein.	CREB binding protein b.	0.557
GATA2	LOC108250440	ENSKMAP00000026926	ENSKMAP00000008734	Uncharacterized protein.	E1A binding protein p300 a.	0.615
GATA2	ep300	ENSKMAP00000026926	ENSKMAP00000020640	Uncharacterized protein.	E1A binding protein p300 b.	0.615
LOC108228750	LOC108241482	ENSKMAP00000005867	ENSKMAP00000026436	Uncharacterized protein.	CREB binding protein a.	0.537
LOC108228750	LOC108247643	ENSKMAP00000005867	ENSKMAP00000019200	Uncharacterized protein.	CREB binding protein b.	0.537
LOC108228750	LOC108250440	ENSKMAP00000005867	ENSKMAP00000008734	Uncharacterized protein.	E1A binding protein p300 a.	0.643
LOC108228750	ep300	ENSKMAP00000005867	ENSKMAP00000020640	Uncharacterized protein.	E1A binding protein p300 b.	0.643
LOC108228999	LOC108241482	ENSKMAP00000014115	ENSKMAP00000026436	Mothers against decapentaplegic homolog.	CREB binding protein a.	0.511
LOC108228999	LOC108247643	ENSKMAP00000014115	ENSKMAP00000019200	Mothers against decapentaplegic homolog.	CREB binding protein b.	0.511
LOC108228999	LOC108250440	ENSKMAP00000014115	ENSKMAP00000008734	Mothers against decapentaplegic homolog.	E1A binding protein p300 a.	0.603
LOC108228999	ep300	ENSKMAP00000014115	ENSKMAP00000020640	Mothers against decapentaplegic homolog.	E1A binding protein p300 b.	0.603
LOC108237972	LOC108241482	ENSKMAP00000022094	ENSKMAP00000026436	Uncharacterized protein.	CREB binding protein a.	0.592
LOC108237972	LOC108247437	ENSKMAP00000022094	ENSKMAP00000006911	Uncharacterized protein.	Androgen receptor.	0.901
LOC108237972	LOC108247643	ENSKMAP00000022094	ENSKMAP00000019200	Uncharacterized protein.	CREB binding protein b.	0.592
LOC108237972	LOC108250440	ENSKMAP00000022094	ENSKMAP00000008734	Uncharacterized protein.	E1A binding protein p300 a.	0.620
LOC108237972	ep300	ENSKMAP00000022094	ENSKMAP00000020640	Uncharacterized protein.	E1A binding protein p300 b.	0.620
LOC108237972	med1	ENSKMAP00000022094	ENSKMAP00000023121	Uncharacterized protein.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.571