26 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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Predicted Interactions

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Your Input:
	gtf2e2	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (287 aa)
	taf7l	TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (362 aa)
	LOC108243306	TAFH domain-containing protein. (1037 aa)
	gtf2h4	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (463 aa)
	taf11	TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (204 aa)
	taf6	TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (638 aa)
	LOC108251031	TAFH domain-containing protein. (933 aa)
	taf6l	TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor. (639 aa)
	LOC112450151	Uncharacterized protein. (205 aa)
	taf3	TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto. (982 aa)
	gtf2a1	General transcription factor IIA, 1. (385 aa)
	gtf2b	General transcription factor IIB. (224 aa)
	taf8	TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (306 aa)
	ercc2	Excision repair cross-complementation group 2. (760 aa)
	tbp	TATA box binding protein. (304 aa)
	taf2	TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (1215 aa)
	gtf2h3	General transcription factor IIH, polypeptide 3. (299 aa)
	ENSKMAP00000023670	TAF4 domain-containing protein. (300 aa)
	gtf2e1	General transcription factor IIE, polypeptide 1, alpha. (446 aa)
	LOC108250675	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (274 aa)
	taf10	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (188 aa)
	TAF4	TATA-box binding protein associated factor 4. (894 aa)
	taf12	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (160 aa)
	taf1	Transcription initiation factor TFIID subunit. (1824 aa)
	gtf2a2	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (109 aa)
	gtf2f1	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (530 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSKMAP00000023670	LOC108250675	ENSKMAP00000023670	ENSKMAP00000018130	TAF4 domain-containing protein.	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.930
ENSKMAP00000023670	LOC112450151	ENSKMAP00000023670	ENSKMAP00000007016	TAF4 domain-containing protein.	Uncharacterized protein.	0.793
ENSKMAP00000023670	ercc2	ENSKMAP00000023670	ENSKMAP00000028774	TAF4 domain-containing protein.	Excision repair cross-complementation group 2.	0.706
ENSKMAP00000023670	gtf2a1	ENSKMAP00000023670	ENSKMAP00000004680	TAF4 domain-containing protein.	General transcription factor IIA, 1.	0.752
ENSKMAP00000023670	gtf2a2	ENSKMAP00000023670	ENSKMAP00000014646	TAF4 domain-containing protein.	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	0.840
ENSKMAP00000023670	gtf2b	ENSKMAP00000023670	ENSKMAP00000003261	TAF4 domain-containing protein.	General transcription factor IIB.	0.811
ENSKMAP00000023670	gtf2e1	ENSKMAP00000023670	ENSKMAP00000020856	TAF4 domain-containing protein.	General transcription factor IIE, polypeptide 1, alpha.	0.696
ENSKMAP00000023670	gtf2e2	ENSKMAP00000023670	ENSKMAP00000000406	TAF4 domain-containing protein.	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	0.795
ENSKMAP00000023670	gtf2f1	ENSKMAP00000023670	ENSKMAP00000001405	TAF4 domain-containing protein.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.762
ENSKMAP00000023670	gtf2h3	ENSKMAP00000023670	ENSKMAP00000026350	TAF4 domain-containing protein.	General transcription factor IIH, polypeptide 3.	0.729
ENSKMAP00000023670	gtf2h4	ENSKMAP00000023670	ENSKMAP00000001923	TAF4 domain-containing protein.	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.729
ENSKMAP00000023670	taf1	ENSKMAP00000023670	ENSKMAP00000015762	TAF4 domain-containing protein.	Transcription initiation factor TFIID subunit.	0.953
ENSKMAP00000023670	taf10	ENSKMAP00000023670	ENSKMAP00000017294	TAF4 domain-containing protein.	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	0.930
ENSKMAP00000023670	taf11	ENSKMAP00000023670	ENSKMAP00000014354	TAF4 domain-containing protein.	TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.953
ENSKMAP00000023670	taf12	ENSKMAP00000023670	ENSKMAP00000017110	TAF4 domain-containing protein.	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.953
ENSKMAP00000023670	taf2	ENSKMAP00000023670	ENSKMAP00000027007	TAF4 domain-containing protein.	TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.953
ENSKMAP00000023670	taf3	ENSKMAP00000023670	ENSKMAP00000005369	TAF4 domain-containing protein.	TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto.	0.879
ENSKMAP00000023670	taf6	ENSKMAP00000023670	ENSKMAP00000010981	TAF4 domain-containing protein.	TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.953
ENSKMAP00000023670	taf6l	ENSKMAP00000023670	ENSKMAP00000007865	TAF4 domain-containing protein.	TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor.	0.889
ENSKMAP00000023670	taf7l	ENSKMAP00000023670	ENSKMAP00000001789	TAF4 domain-containing protein.	TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.953