11 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ercc5	Excision repair cross-complementation group 5. (1028 aa)
	xab2	XPA binding protein 2. (849 aa)
	usp7	Ubiquitin specific peptidase 7 (herpes virus-associated); Belongs to the peptidase C19 family. (1102 aa)
	bivm	Basic, immunoglobulin-like variable motif containing. (481 aa)
	ercc6	Excision repair cross-complementation group 6. (1442 aa)
	ercc2	Excision repair cross-complementation group 2. (760 aa)
	ercc8	Excision repair cross-complementation group 8. (401 aa)
	uvssa	UV-stimulated scaffold protein A. (762 aa)
	polr2i	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
	LOC108238001	High mobility group nucleosome binding domain 6. (94 aa)
	ercc3	Excision repair cross-complementation group 3. (783 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC108238001	bivm	ENSKMAP00000021019	ENSKMAP00000020665	High mobility group nucleosome binding domain 6.	Basic, immunoglobulin-like variable motif containing.	0.592
LOC108238001	ercc5	ENSKMAP00000021019	ENSKMAP00000029766	High mobility group nucleosome binding domain 6.	Excision repair cross-complementation group 5.	0.592
LOC108238001	ercc6	ENSKMAP00000021019	ENSKMAP00000027213	High mobility group nucleosome binding domain 6.	Excision repair cross-complementation group 6.	0.786
LOC108238001	ercc8	ENSKMAP00000021019	ENSKMAP00000019650	High mobility group nucleosome binding domain 6.	Excision repair cross-complementation group 8.	0.405
LOC108238001	uvssa	ENSKMAP00000021019	ENSKMAP00000010281	High mobility group nucleosome binding domain 6.	UV-stimulated scaffold protein A.	0.477
LOC108238001	xab2	ENSKMAP00000021019	ENSKMAP00000021207	High mobility group nucleosome binding domain 6.	XPA binding protein 2.	0.613
bivm	LOC108238001	ENSKMAP00000020665	ENSKMAP00000021019	Basic, immunoglobulin-like variable motif containing.	High mobility group nucleosome binding domain 6.	0.592
bivm	ercc2	ENSKMAP00000020665	ENSKMAP00000028774	Basic, immunoglobulin-like variable motif containing.	Excision repair cross-complementation group 2.	0.945
bivm	ercc3	ENSKMAP00000020665	ENSKMAP00000029380	Basic, immunoglobulin-like variable motif containing.	Excision repair cross-complementation group 3.	0.956
bivm	ercc5	ENSKMAP00000020665	ENSKMAP00000029766	Basic, immunoglobulin-like variable motif containing.	Excision repair cross-complementation group 5.	0.880
bivm	ercc6	ENSKMAP00000020665	ENSKMAP00000027213	Basic, immunoglobulin-like variable motif containing.	Excision repair cross-complementation group 6.	0.947
bivm	ercc8	ENSKMAP00000020665	ENSKMAP00000019650	Basic, immunoglobulin-like variable motif containing.	Excision repair cross-complementation group 8.	0.483
ercc2	bivm	ENSKMAP00000028774	ENSKMAP00000020665	Excision repair cross-complementation group 2.	Basic, immunoglobulin-like variable motif containing.	0.945
ercc2	ercc3	ENSKMAP00000028774	ENSKMAP00000029380	Excision repair cross-complementation group 2.	Excision repair cross-complementation group 3.	0.999
ercc2	ercc5	ENSKMAP00000028774	ENSKMAP00000029766	Excision repair cross-complementation group 2.	Excision repair cross-complementation group 5.	0.945
ercc2	ercc6	ENSKMAP00000028774	ENSKMAP00000027213	Excision repair cross-complementation group 2.	Excision repair cross-complementation group 6.	0.938
ercc2	ercc8	ENSKMAP00000028774	ENSKMAP00000019650	Excision repair cross-complementation group 2.	Excision repair cross-complementation group 8.	0.851
ercc2	polr2i	ENSKMAP00000028774	ENSKMAP00000002043	Excision repair cross-complementation group 2.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.980
ercc2	usp7	ENSKMAP00000028774	ENSKMAP00000023602	Excision repair cross-complementation group 2.	Ubiquitin specific peptidase 7 (herpes virus-associated); Belongs to the peptidase C19 family.	0.435
ercc2	uvssa	ENSKMAP00000028774	ENSKMAP00000010281	Excision repair cross-complementation group 2.	UV-stimulated scaffold protein A.	0.524