29 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	sprtn	SprT-like N-terminal domain. (569 aa)
	rev3l	REV3 like, DNA directed polymerase zeta catalytic subunit. (2448 aa)
	poldip2	Polymerase (DNA-directed), delta interacting protein 2. (375 aa)
	ENSKMAP00000019873	UBIQUITIN_CONJUGAT_2 domain-containing protein. (144 aa)
	LOC108235081	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (153 aa)
	msh2	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (934 aa)
	pclaf	PCNA clamp associated factor. (116 aa)
	rev1	REV1 DNA directed polymerase. (1363 aa)
	pold1	DNA polymerase. (1105 aa)
	parp10	Poly [ADP-ribose] polymerase. (1198 aa)
	pold2	Polymerase (DNA directed), delta 2, regulatory subunit. (471 aa)
	pcna	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
	ube2n	Ubiquitin conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. (154 aa)
	ube2v2	Ubiquitin-conjugating enzyme E2 variant 2. (145 aa)
	poli	Polymerase (DNA directed) iota. (716 aa)
	dtl	Denticleless E3 ubiquitin protein ligase homolog (Drosophila). (621 aa)
	polh	Polymerase (DNA directed), eta. (738 aa)
	LOC108241508	Zgc:136908; Belongs to the AAA ATPase family. (808 aa)
	brca1	Uncharacterized protein. (1354 aa)
	LOC108249566	Ubiquitin-conjugating enzyme E2 variant 1. (147 aa)
	pole2	DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (528 aa)
	primpol	Primase and polymerase (DNA-directed). (492 aa)
	polk	Polymerase (DNA directed) kappa. (401 aa)
	vcp	Valosin containing protein; Belongs to the AAA ATPase family. (806 aa)
	pold3	Polymerase (DNA-directed), delta 3, accessory subunit. (440 aa)
	zbtb1	Zinc finger and BTB domain containing 1. (685 aa)
	rad18	RAD18 E3 ubiquitin protein ligase. (490 aa)
	nsmce1	NSE1 homolog, SMC5-SMC6 complex component. (247 aa)
	LOC108241443	Calcyon neuron-specific vesicular protein. (205 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSKMAP00000019873	LOC108235081	ENSKMAP00000019873	ENSKMAP00000018377	UBIQUITIN_CONJUGAT_2 domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.939
ENSKMAP00000019873	LOC108249566	ENSKMAP00000019873	ENSKMAP00000024356	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Ubiquitin-conjugating enzyme E2 variant 1.	0.511
ENSKMAP00000019873	brca1	ENSKMAP00000019873	ENSKMAP00000024393	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Uncharacterized protein.	0.461
ENSKMAP00000019873	pcna	ENSKMAP00000019873	ENSKMAP00000003800	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.816
ENSKMAP00000019873	pold1	ENSKMAP00000019873	ENSKMAP00000013397	UBIQUITIN_CONJUGAT_2 domain-containing protein.	DNA polymerase.	0.424
ENSKMAP00000019873	pold3	ENSKMAP00000019873	ENSKMAP00000022542	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Polymerase (DNA-directed), delta 3, accessory subunit.	0.454
ENSKMAP00000019873	polh	ENSKMAP00000019873	ENSKMAP00000025604	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Polymerase (DNA directed), eta.	0.744
ENSKMAP00000019873	poli	ENSKMAP00000019873	ENSKMAP00000010639	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Polymerase (DNA directed) iota.	0.514
ENSKMAP00000019873	rad18	ENSKMAP00000019873	ENSKMAP00000027942	UBIQUITIN_CONJUGAT_2 domain-containing protein.	RAD18 E3 ubiquitin protein ligase.	0.799
ENSKMAP00000019873	rev1	ENSKMAP00000019873	ENSKMAP00000001976	UBIQUITIN_CONJUGAT_2 domain-containing protein.	REV1 DNA directed polymerase.	0.661
ENSKMAP00000019873	rev3l	ENSKMAP00000019873	ENSKMAP00000021484	UBIQUITIN_CONJUGAT_2 domain-containing protein.	REV3 like, DNA directed polymerase zeta catalytic subunit.	0.817
ENSKMAP00000019873	ube2n	ENSKMAP00000019873	ENSKMAP00000006002	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Ubiquitin conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.	0.939
LOC108235081	ENSKMAP00000019873	ENSKMAP00000018377	ENSKMAP00000019873	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.939
LOC108235081	LOC108241508	ENSKMAP00000018377	ENSKMAP00000025241	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Zgc:136908; Belongs to the AAA ATPase family.	0.411
LOC108235081	LOC108249566	ENSKMAP00000018377	ENSKMAP00000024356	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Ubiquitin-conjugating enzyme E2 variant 1.	0.972
LOC108235081	brca1	ENSKMAP00000018377	ENSKMAP00000024393	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Uncharacterized protein.	0.703
LOC108235081	pcna	ENSKMAP00000018377	ENSKMAP00000003800	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.829
LOC108235081	polh	ENSKMAP00000018377	ENSKMAP00000025604	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Polymerase (DNA directed), eta.	0.576
LOC108235081	rad18	ENSKMAP00000018377	ENSKMAP00000027942	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	RAD18 E3 ubiquitin protein ligase.	0.859
LOC108235081	rev1	ENSKMAP00000018377	ENSKMAP00000001976	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	REV1 DNA directed polymerase.	0.622