STRINGSTRING
CPSF7 CPSF7 pcf11 pcf11 polr2i polr2i znrd1 znrd1 cstf2 cstf2 LOC108241575 LOC108241575 cpsf2 cpsf2 ENSKMAP00000021047 ENSKMAP00000021047 cpsf6 cpsf6 tut1 tut1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CPSF7Cleavage and polyadenylation specific factor 7. (471 aa)
pcf11PCF11 cleavage and polyadenylation factor subunit. (1568 aa)
polr2iDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
znrd1DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (119 aa)
cstf2Cleavage stimulation factor, 3' pre-RNA, subunit 2. (491 aa)
LOC108241575FIP1 like 1b (S. cerevisiae). (541 aa)
cpsf2Cleavage and polyadenylation specificity factor subunit 2. (787 aa)
ENSKMAP00000021047Cleavage and polyadenylation specific factor 4. (265 aa)
cpsf6Cleavage and polyadenylation specific factor 6. (582 aa)
tut1Terminal uridylyl transferase 1, U6 snRNA-specific. (800 aa)
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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