83 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	r3hdm2	R3H domain containing 2. (1101 aa)
	LOC108242136	Myogenic factor. (268 aa)
	LOC108249004	Myosin light chain, phosphorylatable, fast skeletal muscle b. (170 aa)
	LOC108251412	WH1 domain-containing protein. (359 aa)
	LOC108240435	Myosin, light chain 1, alkali; skeletal, fast. (191 aa)
	LOC108238598	Ankyrin repeat domain 33Bb. (483 aa)
	hoxc8-2	Homeobox protein HOXC10a. (331 aa)
	meox2	Mesenchyme homeobox 2a. (313 aa)
	LOC108237363	SET and MYND domain containing 2a. (435 aa)
	LOC108238633	Kelch-like family member 40a. (613 aa)
	disp1	Dispatched homolog 1 (Drosophila). (1543 aa)
	ENSKMAP00000026022	Ankyrin repeat domain 33Ab. (376 aa)
	hlx	H2.0-like homeo box 1 (Drosophila). (400 aa)
	nphs1	NPHS1 adhesion molecule, nephrin. (1134 aa)
	MYOZ1	Myozenin 1. (318 aa)
	LOC108243234	Myocyte enhancer factor 2d. (595 aa)
	ENSKMAP00000022754	HP domain-containing protein. (676 aa)
	FOXN2	Forkhead box N2b. (412 aa)
	gtf3c5	General transcription factor IIIC, polypeptide 5. (530 aa)
	LOC108248320	Myosin IXAb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2356 aa)
	LOC108240803	Kelch-like family member 41a. (598 aa)
	adss1	Adenylosuccinate synthetase isozyme 1; Component of the purine nucleotide cycle (PNC), which interconverts IMP and AMP to regulate the nucleotide levels in various tissues, and which contributes to glycolysis and ammoniagenesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP. (456 aa)
	ep300	E1A binding protein p300 b. (2785 aa)
	smo	Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family. (818 aa)
	popdc3	Popeye domain containing 3. (297 aa)
	Bves	Blood vessel epicardial substance. (261 aa)
	atf3	Activating transcription factor 3. (224 aa)
	LOC108242029	RNA binding motif protein 24b. (210 aa)
	popdc2	Popeye domain containing 2. (372 aa)
	ripor3	RIPOR family member 3. (999 aa)
	myog	Myogenin. (250 aa)
	MYOD1	Myogenic factor. (267 aa)
	nf1	Neurofibromin 1b. (2727 aa)
	LOC108243621	Kruppel-like factor 5 like. (451 aa)
	ENSKMAP00000017957	R3H domain-containing protein. (311 aa)
	rb1	Retinoblastoma 1. (915 aa)
	LOC108234609	Homer scaffold protein 1b. (374 aa)
	shh	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. (413 aa)
	unc45b	Unc-45 myosin chaperone B. (930 aa)
	tcf21	Transcription factor 21. (179 aa)
	stac3	SH3 and cysteine rich domain 3. (333 aa)
	myf6	Myogenic factor 6. (238 aa)
	myf5	Myogenic factor. (240 aa)
	LOC108240106	Uncharacterized protein. (428 aa)
	LOC108248208	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (180 aa)
	MEF2D	Myocyte enhancer factor 2D. (579 aa)
	klhl40	Kelch-like family member 40b. (617 aa)
	spg11	SPG11 vesicle trafficking associated, spatacsin. (2262 aa)
	LOC108235895	QKI, KH domain containing, RNA binding a. (334 aa)
	LMOD3	Leiomodin 3. (638 aa)
	LOC108237792	Myosin light chain, phosphorylatable, fast skeletal muscle a. (178 aa)
	lamc3	Laminin, gamma 3. (1636 aa)
	ENSKMAP00000011951	HP domain-containing protein. (72 aa)
	selenon	Selenoprotein N. (548 aa)
	phox2b	Paired like homeobox 2Bb. (285 aa)
	LOC108235392	Kell metallo-endopeptidase (Kell blood group). (788 aa)
	ripor2	RHO family interacting cell polarization regulator 2. (1073 aa)
	LOC108250440	E1A binding protein p300 a. (2399 aa)
	bin3	Bridging integrator 3. (253 aa)
	LOC108237959	RNA binding motif protein 24a. (251 aa)
	six1	SIX homeobox 1a. (284 aa)
	myoz2	Myozenin 2a. (267 aa)
	ankrd33b	Ankyrin repeat domain 33ba. (521 aa)
	LOC108235511	RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events. (385 aa)
	LOC108245696	BTB domain-containing protein. (607 aa)
	cdk5	Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily. (292 aa)
	LOC108233756	Ankyrin repeat and SOCS box containing 2b. (474 aa)
	LOC108240686	Uncharacterized protein. (651 aa)
	LOC108232375	Kruppel-like factor 5b. (445 aa)
	taz	Tafazzin family protein; Belongs to the taffazin family. (241 aa)
	gdf6	Growth differentiation factor 6a. (408 aa)
	dner	Delta/notch-like EGF repeat containing. (766 aa)
	LOC108250318	SET and MYND domain containing 1a. (475 aa)
	ENSKMAP00000002913	Growth differentiation factor 5. (393 aa)
	LOC108249100	Ankyrin repeat and SOCS box containing 2a, tandem duplicate 1. (691 aa)
	LOC108249102	Uncharacterized protein. (658 aa)
	myo9a	Myosin IXAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2462 aa)
	mstn	Myostatin b. (396 aa)
	gpcpd1	Glycerophosphocholine phosphodiesterase 1. (706 aa)
	LOC108233777	SET and MYND domain containing 1b. (488 aa)
	LOC108235176	Ankyrin repeat domain 33Aa. (430 aa)
	LOC108232819	Myozenin 2b. (214 aa)
	klf5	Progesterone immunomodulatory binding factor 1. (492 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LMOD3	LOC108232819	ENSKMAP00000013158	ENSKMAP00000000308	Leiomodin 3.	Myozenin 2b.	0.515
LMOD3	LOC108237792	ENSKMAP00000013158	ENSKMAP00000012576	Leiomodin 3.	Myosin light chain, phosphorylatable, fast skeletal muscle a.	0.462
LMOD3	LOC108240435	ENSKMAP00000013158	ENSKMAP00000028522	Leiomodin 3.	Myosin, light chain 1, alkali; skeletal, fast.	0.587
LMOD3	LOC108249004	ENSKMAP00000013158	ENSKMAP00000028606	Leiomodin 3.	Myosin light chain, phosphorylatable, fast skeletal muscle b.	0.473
LMOD3	myoz2	ENSKMAP00000013158	ENSKMAP00000007654	Leiomodin 3.	Myozenin 2a.	0.515
LOC108232375	LOC108250440	ENSKMAP00000004870	ENSKMAP00000008734	Kruppel-like factor 5b.	E1A binding protein p300 a.	0.470
LOC108232375	ep300	ENSKMAP00000004870	ENSKMAP00000020640	Kruppel-like factor 5b.	E1A binding protein p300 b.	0.470
LOC108232819	LMOD3	ENSKMAP00000000308	ENSKMAP00000013158	Myozenin 2b.	Leiomodin 3.	0.515
LOC108232819	LOC108240435	ENSKMAP00000000308	ENSKMAP00000028522	Myozenin 2b.	Myosin, light chain 1, alkali; skeletal, fast.	0.426
LOC108233777	unc45b	ENSKMAP00000000457	ENSKMAP00000016795	SET and MYND domain containing 1b.	Unc-45 myosin chaperone B.	0.701
LOC108235511	LOC108235895	ENSKMAP00000006833	ENSKMAP00000013226	RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.	QKI, KH domain containing, RNA binding a.	0.494
LOC108235511	LOC108237959	ENSKMAP00000006833	ENSKMAP00000008398	RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.	RNA binding motif protein 24a.	0.622
LOC108235511	LOC108242029	ENSKMAP00000006833	ENSKMAP00000019446	RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.	RNA binding motif protein 24b.	0.756
LOC108235895	LOC108235511	ENSKMAP00000013226	ENSKMAP00000006833	QKI, KH domain containing, RNA binding a.	RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.	0.494
LOC108237792	LMOD3	ENSKMAP00000012576	ENSKMAP00000013158	Myosin light chain, phosphorylatable, fast skeletal muscle a.	Leiomodin 3.	0.462
LOC108237792	LOC108240435	ENSKMAP00000012576	ENSKMAP00000028522	Myosin light chain, phosphorylatable, fast skeletal muscle a.	Myosin, light chain 1, alkali; skeletal, fast.	0.948
LOC108237792	MYOZ1	ENSKMAP00000012576	ENSKMAP00000023143	Myosin light chain, phosphorylatable, fast skeletal muscle a.	Myozenin 1.	0.695
LOC108237959	LOC108235511	ENSKMAP00000008398	ENSKMAP00000006833	RNA binding motif protein 24a.	RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.	0.622
LOC108238633	smo	ENSKMAP00000026849	ENSKMAP00000020439	Kelch-like family member 40a.	Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family.	0.456
LOC108240435	LMOD3	ENSKMAP00000028522	ENSKMAP00000013158	Myosin, light chain 1, alkali; skeletal, fast.	Leiomodin 3.	0.587