STRINGSTRING
LOC108241552 LOC108241552 ndufa9 ndufa9 LOC108236430 LOC108236430 LOC108237534 LOC108237534 LOC108244375 LOC108244375 LOC108247904 LOC108247904 LOC108251412 LOC108251412 top1 top1 LOC108235153 LOC108235153 LOC108249417 LOC108249417 nr0b2 nr0b2 gpr176 gpr176 prmt5 prmt5 LOC108244370 LOC108244370 LOC108245508 LOC108245508 PPP1CB PPP1CB LOC108243298 LOC108243298 kdm8 kdm8 LOC108242668 LOC108242668 LOC108243703 LOC108243703 LOC108240353 LOC108240353 LOC108230200 LOC108230200 LOC108235292 LOC108235292 nrip1 nrip1 BHLHE40 BHLHE40 LOC108237298 LOC108237298 LOC108235787 LOC108235787 LOC108250107 LOC108250107 gpr157 gpr157 timeless timeless LOC108243135 LOC108243135 ep300 ep300 LOC108230144 LOC108230144 LOC108251202 LOC108251202 LOC108236158 LOC108236158 nampt nampt LOC108234609 LOC108234609 btbd9 btbd9 cunh3orf70 cunh3orf70 LOC108239667 LOC108239667 LOC108239412 LOC108239412 Nfil3 Nfil3 AANAT AANAT LOC108237541 LOC108237541 LOC108241809 LOC108241809 ENSKMAP00000013199 ENSKMAP00000013199 LOC108249307 LOC108249307 id3 id3 LOC108234925 LOC108234925 LOC108237797 LOC108237797 LOC108237801 LOC108237801 LOC108245229 LOC108245229 sirt1 sirt1 id2 id2 ogt ogt ppp1cc ppp1cc LOC108247476 LOC108247476 LOC108247484 LOC108247484 sirt6 sirt6 LOC108246331 LOC108246331 HDAC3 HDAC3 arntl arntl LOC108250440 LOC108250440 egr3 egr3 LOC108232358 LOC108232358 LOC108232480 LOC108232480 naglu naglu clock clock LOC108247432 LOC108247432 huwe1 huwe1 egr1 egr1 LOC108235544 LOC108235544 ppargc1a ppargc1a LOC108239981 LOC108239981 bhlhe41 bhlhe41 LOC108239401 LOC108239401 LOC108246227 LOC108246227 LOC108250939 LOC108250939 mycbp2 mycbp2 LOC112450224 LOC112450224 nudt12 nudt12 impdh2 impdh2 LOC108229360 LOC108229360 PER2 PER2 LOC108249656 LOC108249656 ciart ciart LOC108249639 LOC108249639 id4 id4 ENSKMAP00000000365 ENSKMAP00000000365
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC108241552Clock circadian regulator b. (899 aa)
ndufa9NADH:ubiquinone oxidoreductase subunit A9a. (381 aa)
LOC108236430Nuclear factor, interleukin 3 regulated, member 5. (604 aa)
LOC108237534DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (746 aa)
LOC108244375Inhibitor of DNA binding 1, HLH protein. (129 aa)
LOC108247904Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (325 aa)
LOC108251412WH1 domain-containing protein. (359 aa)
top1DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (748 aa)
LOC108235153Nuclear receptor subfamily 1, group D, member 4a. (576 aa)
LOC108249417Nerve growth factor receptor b. (427 aa)
nr0b2Nuclear receptor subfamily 0, group B, member 2a. (258 aa)
gpr176G protein-coupled receptor 176. (568 aa)
prmt5Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily. (631 aa)
LOC108244370Basic helix-loop-helix family, member e40. (406 aa)
LOC108245508Endo/exonuclease/phosphatase domain-containing protein. (477 aa)
PPP1CBSerine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (327 aa)
LOC108243298Nuclear receptor subfamily 1, group D, member 2a. (553 aa)
kdm8Lysine (K)-specific demethylase 8. (411 aa)
LOC108242668D site albumin promoter binding protein a. (374 aa)
LOC108243703Arylalkylamine N-acetyltransferase 2. (249 aa)
LOC108240353Nicotinamide phosphoribosyltransferase; Belongs to the NAPRTase family. (496 aa)
LOC108230200Uncharacterized protein. (356 aa)
LOC108235292DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (767 aa)
nrip1Nuclear receptor interacting protein 1b. (1092 aa)
BHLHE40Basic helix-loop-helix family member e40. (425 aa)
LOC108237298Cryptochrome circadian regulator 5. (546 aa)
LOC108235787Nuclear receptor subfamily 1, group D, member 4b. (559 aa)
LOC108250107Cryptochrome circadian regulator 3a. (644 aa)
gpr157G protein-coupled receptor 157. (337 aa)
timelessTimeless circadian clock. (1247 aa)
LOC108243135Tumor necrosis factor receptor superfamily, member 11a, NFKB activator. (659 aa)
ep300E1A binding protein p300 b. (2785 aa)
LOC108230144Si:ch1073-390k14.1. (870 aa)
LOC108251202Nuclear receptor subfamily 1, group d, member 1. (604 aa)
LOC108236158N-acetyltransferase domain-containing protein. (226 aa)
namptNicotinamide phosphoribosyltransferase; Belongs to the NAPRTase family. (491 aa)
LOC108234609Homer scaffold protein 1b. (374 aa)
btbd9BTB (POZ) domain containing 9. (612 aa)
cunh3orf70Zgc:162707. (291 aa)
LOC108239667Period circadian clock 2. (1492 aa)
LOC108239412Circadian associated repressor of transcription a. (307 aa)
Nfil3Nuclear factor, interleukin 3 regulated. (427 aa)
AANATArylalkylamine N-acetyltransferase 1. (201 aa)
LOC108237541Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (327 aa)
LOC108241809Period circadian clock 1b. (1474 aa)
ENSKMAP00000013199BHLH domain-containing protein. (139 aa)
LOC108249307Aryl hydrocarbon receptor 2. (945 aa)
id3Inhibitor of DNA binding 3. (117 aa)
LOC1082349255-hydroxytryptamine (serotonin) receptor 7b. (415 aa)
LOC108237797Nerve growth factor receptor a (TNFR superfamily, member 16). (352 aa)
LOC108237801Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (332 aa)
LOC108245229Activating transcription factor 5a. (505 aa)
sirt1Sirtuin 1. (693 aa)
id2Inhibitor of DNA binding 2a. (139 aa)
ogtO-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1. (1038 aa)
ppp1ccSerine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (323 aa)
LOC108247476Nuclear factor, interleukin 3 regulated, member 6. (407 aa)
LOC108247484BZIP domain-containing protein. (621 aa)
sirt6Sirtuin 6. (350 aa)
LOC108246331Activating transcription factor 5b. (504 aa)
HDAC3Histone deacetylase 3; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4), and some other non-histone substrates. Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. (428 aa)
arntlUncharacterized protein. (630 aa)
LOC108250440E1A binding protein p300 a. (2399 aa)
egr3Early growth response 3. (410 aa)
LOC108232358Uncharacterized protein. (928 aa)
LOC108232480Uncharacterized protein. (963 aa)
nagluN-acetylglucosaminidase, alpha. (751 aa)
clockUncharacterized protein. (741 aa)
LOC108247432Neuronal PAS domain protein 2. (811 aa)
huwe1HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1. (4192 aa)
egr1Early growth response protein; Transcriptional regulator. Recognizes and binds to the DNA sequence 5'-GCG(T/G)GGGCG-3'(EGR-site) in the promoter region of target genes. Binds double-stranded target DNA, irrespective of the cytosine methylation status. Regulates the transcription of numerous target genes, and thereby plays an important role in regulating the response to growth factors, DNA damage, and ischemia. Plays a role in the regulation of cell survival, proliferation and cell death. Belongs to the EGR C2H2-type zinc-finger protein family. (509 aa)
LOC108235544D site albumin promoter binding protein b. (368 aa)
ppargc1aPeroxisome proliferator-activated receptor gamma, coactivator 1 alpha. (940 aa)
LOC108239981Aryl hydrocarbon receptor nuclear translocator-like 2 protein. (638 aa)
bhlhe41Basic helix-loop-helix family, member e41. (431 aa)
LOC108239401Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (327 aa)
LOC1082462275-hydroxytryptamine (serotonin) receptor 7a; Belongs to the G-protein coupled receptor 1 family. (413 aa)
LOC108250939Cryptochrome circadian regulator 2. (477 aa)
mycbp2MYC binding protein 2. (4580 aa)
LOC112450224Nuclear factor, interleukin 3 regulated, member 4. (197 aa)
nudt12Nudix (nucleoside diphosphate linked moiety X)-type motif 12. (453 aa)
impdh2Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. (538 aa)
LOC108229360Period circadian clock 3. (1182 aa)
PER2Period circadian regulator 2. (1544 aa)
LOC108249656Nocturnin. (448 aa)
ciartUncharacterized protein. (454 aa)
LOC108249639Nuclear receptor subfamily 1, group D, member 2b. (576 aa)
id4Inhibitor of DNA binding 4. (153 aa)
ENSKMAP00000000365PAS domain-containing protein. (297 aa)
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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