19 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	poldip2	Polymerase (DNA-directed), delta interacting protein 2. (375 aa)
	rev3l	REV3 like, DNA directed polymerase zeta catalytic subunit. (2448 aa)
	sprtn	SprT-like N-terminal domain. (569 aa)
	pold3	Polymerase (DNA-directed), delta 3, accessory subunit. (440 aa)
	pclaf	PCNA clamp associated factor. (116 aa)
	dtl	Denticleless E3 ubiquitin protein ligase homolog (Drosophila). (621 aa)
	LOC108241508	Zgc:136908; Belongs to the AAA ATPase family. (808 aa)
	polh	Polymerase (DNA directed), eta. (738 aa)
	zbtb1	Zinc finger and BTB domain containing 1. (685 aa)
	primpol	Primase and polymerase (DNA-directed). (492 aa)
	rev1	REV1 DNA directed polymerase. (1363 aa)
	parp10	Poly [ADP-ribose] polymerase. (1198 aa)
	pold2	Polymerase (DNA directed), delta 2, regulatory subunit. (471 aa)
	pcna	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
	poli	Polymerase (DNA directed) iota. (716 aa)
	pold1	DNA polymerase. (1105 aa)
	pole2	DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (528 aa)
	polk	Polymerase (DNA directed) kappa. (401 aa)
	vcp	Valosin containing protein; Belongs to the AAA ATPase family. (806 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC108241508	pcna	ENSKMAP00000025241	ENSKMAP00000003800	Zgc:136908; Belongs to the AAA ATPase family.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.659
LOC108241508	polh	ENSKMAP00000025241	ENSKMAP00000025604	Zgc:136908; Belongs to the AAA ATPase family.	Polymerase (DNA directed), eta.	0.575
LOC108241508	poli	ENSKMAP00000025241	ENSKMAP00000010639	Zgc:136908; Belongs to the AAA ATPase family.	Polymerase (DNA directed) iota.	0.486
LOC108241508	sprtn	ENSKMAP00000025241	ENSKMAP00000022128	Zgc:136908; Belongs to the AAA ATPase family.	SprT-like N-terminal domain.	0.851
LOC108241508	vcp	ENSKMAP00000025241	ENSKMAP00000018175	Zgc:136908; Belongs to the AAA ATPase family.	Valosin containing protein; Belongs to the AAA ATPase family.	0.900
dtl	pclaf	ENSKMAP00000024301	ENSKMAP00000023850	Denticleless E3 ubiquitin protein ligase homolog (Drosophila).	PCNA clamp associated factor.	0.581
dtl	pcna	ENSKMAP00000024301	ENSKMAP00000003800	Denticleless E3 ubiquitin protein ligase homolog (Drosophila).	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.984
dtl	pold1	ENSKMAP00000024301	ENSKMAP00000013397	Denticleless E3 ubiquitin protein ligase homolog (Drosophila).	DNA polymerase.	0.762
dtl	pold2	ENSKMAP00000024301	ENSKMAP00000003731	Denticleless E3 ubiquitin protein ligase homolog (Drosophila).	Polymerase (DNA directed), delta 2, regulatory subunit.	0.763
dtl	pole2	ENSKMAP00000024301	ENSKMAP00000014071	Denticleless E3 ubiquitin protein ligase homolog (Drosophila).	DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.	0.854
dtl	rev3l	ENSKMAP00000024301	ENSKMAP00000021484	Denticleless E3 ubiquitin protein ligase homolog (Drosophila).	REV3 like, DNA directed polymerase zeta catalytic subunit.	0.600
pclaf	dtl	ENSKMAP00000023850	ENSKMAP00000024301	PCNA clamp associated factor.	Denticleless E3 ubiquitin protein ligase homolog (Drosophila).	0.581
pclaf	pcna	ENSKMAP00000023850	ENSKMAP00000003800	PCNA clamp associated factor.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.964
pclaf	pold1	ENSKMAP00000023850	ENSKMAP00000013397	PCNA clamp associated factor.	DNA polymerase.	0.498
pclaf	pold2	ENSKMAP00000023850	ENSKMAP00000003731	PCNA clamp associated factor.	Polymerase (DNA directed), delta 2, regulatory subunit.	0.620
pclaf	pole2	ENSKMAP00000023850	ENSKMAP00000014071	PCNA clamp associated factor.	DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.	0.622
pcna	LOC108241508	ENSKMAP00000003800	ENSKMAP00000025241	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	Zgc:136908; Belongs to the AAA ATPase family.	0.659
pcna	dtl	ENSKMAP00000003800	ENSKMAP00000024301	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	Denticleless E3 ubiquitin protein ligase homolog (Drosophila).	0.984
pcna	pclaf	ENSKMAP00000003800	ENSKMAP00000023850	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	PCNA clamp associated factor.	0.964
pcna	pold1	ENSKMAP00000003800	ENSKMAP00000013397	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	DNA polymerase.	0.999