63 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NCSTN	Nicastrin. (701 aa)
	LOC108242789	Paired box 2a. (417 aa)
	LOC108239148	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (237 aa)
	chmp1a	Charged multivesicular body protein 1A. (198 aa)
	ENSKMAP00000022147	WD repeat domain 73. (385 aa)
	gnpat	Glyceronephosphate O-acyltransferase; Belongs to the GPAT/DAPAT family. (679 aa)
	hspa5	Heat shock protein 5; Belongs to the heat shock protein 70 family. (653 aa)
	KNDC1	Kinase non-catalytic C-lobe domain containing 1. (1751 aa)
	bmi1	Bmi1 polycomb ring finger oncogene 1a. (346 aa)
	LOC108247690	Si:ch73-21k16.5; Belongs to the GPAT/DAPAT family. (668 aa)
	smo	Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family. (818 aa)
	LOC108246548	CRK proto-oncogene, adaptor protein. (310 aa)
	mecp2	Methyl CpG binding protein 2. (1055 aa)
	LOC108245342	Seizure related 6 homolog b. (904 aa)
	ENSKMAP00000019777	Whirlin a. (477 aa)
	LOC108249458	Serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2; Belongs to the serpin family. (395 aa)
	ttc21b	Tetratricopeptide repeat domain 21B. (1318 aa)
	gbx2	Gastrulation brain homeobox 2. (335 aa)
	LOC108249631	Paired box 2b. (391 aa)
	LOC108247079	Cyclin-dependent kinase 5 activator. (334 aa)
	crkl	V-crk avian sarcoma virus CT10 oncogene homolog-like. (316 aa)
	clp1	Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...] (441 aa)
	ENSKMAP00000015205	Paired domain-containing protein. (150 aa)
	LOC108243012	Kelch-like family member 4. (732 aa)
	sez6l2	Seizure related 6 homolog (mouse)-like 2. (886 aa)
	LOC108233854	LIM homeobox 1b. (426 aa)
	LOC108233887	Seizure related 6 homolog a. (1014 aa)
	ttll1	Tubulin tyrosine ligase-like family, member 1. (424 aa)
	LOC108232684	Si:ch211-160f23.7. (229 aa)
	pax8	Paired box 8. (508 aa)
	LOC108248149	V-crk avian sarcoma virus CT10 oncogene homolog. (307 aa)
	pdss2	Prenyl (decaprenyl) diphosphate synthase, subunit 2; Belongs to the FPP/GGPP synthase family. (384 aa)
	SNX14	Sorting nexin 14. (989 aa)
	fzd4	Frizzled class receptor 4; Belongs to the G-protein coupled receptor Fz/Smo family. (545 aa)
	kif14	Kinesin family member 14; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1037 aa)
	cep290	Centrosomal protein 290. (2263 aa)
	LOC108240562	Ubiquinol-cytochrome c reductase, complex III subunit VII. (80 aa)
	naglu	N-acetylglucosaminidase, alpha. (751 aa)
	cdk5r1	Cyclin-dependent kinase 5 activator. (308 aa)
	cdk5	Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily. (292 aa)
	ENSKMAP00000005797	Homeobox protein engrailed-like. (207 aa)
	LOC108232166	Orthodenticle homeobox 2b. (290 aa)
	en1	Homeobox protein engrailed-like. (278 aa)
	lhx1	LIM homeobox 1a. (407 aa)
	LOC108245622	Whirlin b. (935 aa)
	Rbm7	RRM domain-containing protein. (93 aa)
	ENSKMAP00000002396	Uncharacterized protein. (300 aa)
	LOC108231762	Homeobox domain-containing protein. (295 aa)
	klhl5	Kelch-like family member 5. (703 aa)
	pax5	Paired box 5. (386 aa)
	sez6l	Seizure related 6 homolog (mouse)-like. (893 aa)
	cdk5r2	Cyclin-dependent kinase 5, regulatory subunit 2b (p39). (296 aa)
	abl1	Tyrosine-protein kinase. (1121 aa)
	nox5	RPGRIP1 like. (1254 aa)
	abl2	Tyrosine-protein kinase. (1203 aa)
	wnt1	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (370 aa)
	LOC108247913	Cyclin-dependent kinase 5 activator. (323 aa)
	LOC108250219	Sorting nexin 14. (926 aa)
	agtpbp1	ATP/GTP binding protein 1. (1243 aa)
	LOC108247334	Coenzyme Q8B. (642 aa)
	xrcc1	X-ray repair complementing defective repair in Chinese hamster cells 1. (629 aa)
	ENSKMAP00000025178	Uncharacterized protein. (431 aa)
	cep55	Centrosomal protein 55 like. (506 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSKMAP00000002396	smo	ENSKMAP00000002396	ENSKMAP00000020439	Uncharacterized protein.	Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family.	0.546
ENSKMAP00000019777	nox5	ENSKMAP00000019777	ENSKMAP00000023467	Whirlin a.	RPGRIP1 like.	0.657
ENSKMAP00000019777	ttc21b	ENSKMAP00000019777	ENSKMAP00000019654	Whirlin a.	Tetratricopeptide repeat domain 21B.	0.547
ENSKMAP00000022147	cdk5	ENSKMAP00000022147	ENSKMAP00000006034	WD repeat domain 73.	Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily.	0.408
ENSKMAP00000022147	mecp2	ENSKMAP00000022147	ENSKMAP00000020135	WD repeat domain 73.	Methyl CpG binding protein 2.	0.658
ENSKMAP00000025178	nox5	ENSKMAP00000025178	ENSKMAP00000023467	Uncharacterized protein.	RPGRIP1 like.	0.600
ENSKMAP00000025178	ttc21b	ENSKMAP00000025178	ENSKMAP00000019654	Uncharacterized protein.	Tetratricopeptide repeat domain 21B.	0.415
LOC108239148	gbx2	ENSKMAP00000023606	ENSKMAP00000019300	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Gastrulation brain homeobox 2.	0.615
LOC108239148	smo	ENSKMAP00000023606	ENSKMAP00000020439	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family.	0.408
LOC108239148	wnt1	ENSKMAP00000023606	ENSKMAP00000029025	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.591
LOC108245622	nox5	ENSKMAP00000003386	ENSKMAP00000023467	Whirlin b.	RPGRIP1 like.	0.657
LOC108245622	ttc21b	ENSKMAP00000003386	ENSKMAP00000019654	Whirlin b.	Tetratricopeptide repeat domain 21B.	0.547
LOC108246548	LOC108248149	ENSKMAP00000020188	ENSKMAP00000012072	CRK proto-oncogene, adaptor protein.	V-crk avian sarcoma virus CT10 oncogene homolog.	0.901
LOC108246548	abl1	ENSKMAP00000020188	ENSKMAP00000023528	CRK proto-oncogene, adaptor protein.	Tyrosine-protein kinase.	0.964
LOC108246548	abl2	ENSKMAP00000020188	ENSKMAP00000030125	CRK proto-oncogene, adaptor protein.	Tyrosine-protein kinase.	0.964
LOC108246548	crkl	ENSKMAP00000020188	ENSKMAP00000017813	CRK proto-oncogene, adaptor protein.	V-crk avian sarcoma virus CT10 oncogene homolog-like.	0.910
LOC108247079	cdk5	ENSKMAP00000018117	ENSKMAP00000006034	Cyclin-dependent kinase 5 activator.	Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily.	0.921
LOC108247334	pdss2	ENSKMAP00000027718	ENSKMAP00000011765	Coenzyme Q8B.	Prenyl (decaprenyl) diphosphate synthase, subunit 2; Belongs to the FPP/GGPP synthase family.	0.575
LOC108247690	gnpat	ENSKMAP00000020861	ENSKMAP00000021942	Si:ch73-21k16.5; Belongs to the GPAT/DAPAT family.	Glyceronephosphate O-acyltransferase; Belongs to the GPAT/DAPAT family.	0.903
LOC108247913	cdk5	ENSKMAP00000028863	ENSKMAP00000006034	Cyclin-dependent kinase 5 activator.	Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily.	0.921