41 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSKMAP00000030182	MALT paracaspase 2. (570 aa)
	tnfsf13b	TNF superfamily member 13b; Belongs to the tumor necrosis factor family. (264 aa)
	DNAJB9	J domain-containing protein. (285 aa)
	zbtb1	Zinc finger and BTB domain containing 1. (685 aa)
	nkx2-3	NK2 homeobox 3. (339 aa)
	fnip1	Folliculin interacting protein 1. (1280 aa)
	LOC108244955	LisH domain-containing protein. (1493 aa)
	LOC108244322	BHLH domain-containing protein. (445 aa)
	DCAF1	DDB1 and CUL4 associated factor 1. (1564 aa)
	card11	Caspase recruitment domain family, member 11. (1044 aa)
	traf3ip2	SEFIR domain-containing protein. (439 aa)
	SP3	Sp3a transcription factor. (701 aa)
	rabl3	RAB, member of RAS oncogene family-like 3. (233 aa)
	ITM2A	Integral membrane protein 2A. (245 aa)
	ep300	E1A binding protein p300 b. (2785 aa)
	LOC108240216	TRAF3 interacting protein 2-like. (436 aa)
	itfg2	Integrin alpha FG-GAP repeat containing 2. (436 aa)
	LOC108237852	Zgc:153993. (205 aa)
	LOC108235188	Sp3b transcription factor. (661 aa)
	msh2	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (934 aa)
	ENSKMAP00000015600	CCAAT enhancer binding protein gamma. (139 aa)
	cd79a	CD79a molecule, immunoglobulin-associated alpha. (221 aa)
	LOC108251784	Uncharacterized protein. (1420 aa)
	ENSKMAP00000012285	PH domain-containing protein. (502 aa)
	cmtm7	CKLF-like MARVEL transmembrane domain containing 7. (161 aa)
	LOC108233559	MALT paracaspase 1. (830 aa)
	tpd52	Tumor protein D52. (181 aa)
	Pou2af1	Uncharacterized protein. (198 aa)
	cd79b	Ig-like domain-containing protein. (199 aa)
	LOC108250440	E1A binding protein p300 a. (2399 aa)
	LOC108229937	DnaJ heat shock protein family (Hsp40) member B9a. (216 aa)
	ptprc	Protein tyrosine phosphatase receptor type C. (1165 aa)
	rag1	V(D)J recombination-activating protein 1; Catalytic component of the RAG complex, a multiprotein complex that mediates the DNA cleavage phase during V(D)J recombination. V(D)J recombination assembles a diverse repertoire of immunoglobulin and T-cell receptor genes in developing B and T- lymphocytes through rearrangement of different V (variable), in some cases D (diversity), and J (joining) gene segments. In the RAG complex, RAG1 mediates the DNA-binding to the conserved recombination signal sequences (RSS) and catalyzes the DNA cleavage activities by introducing a double-strand break [...] (1071 aa)
	rag2	Recombination activating gene 2. (533 aa)
	LOC108231281	CD40 ligand; Belongs to the tumor necrosis factor family. (267 aa)
	gon4l	Si:dkey-27c15.3. (1379 aa)
	LOC108239305	Galectin. (135 aa)
	LOC108239307	Galectin. (134 aa)
	LOC108239308	Galectin. (132 aa)
	Atm	Uncharacterized protein. (130 aa)
	ENSKMAP00000000467	TAN domain-containing protein. (123 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Atm	ENSKMAP00000000467	ENSKMAP00000000507	ENSKMAP00000000467	Uncharacterized protein.	TAN domain-containing protein.	0.926
Atm	msh2	ENSKMAP00000000507	ENSKMAP00000015699	Uncharacterized protein.	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.680
ENSKMAP00000000467	Atm	ENSKMAP00000000467	ENSKMAP00000000507	TAN domain-containing protein.	Uncharacterized protein.	0.926
ENSKMAP00000000467	msh2	ENSKMAP00000000467	ENSKMAP00000015699	TAN domain-containing protein.	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.680
ENSKMAP00000030182	card11	ENSKMAP00000030182	ENSKMAP00000021881	MALT paracaspase 2.	Caspase recruitment domain family, member 11.	0.904
LOC108231281	ptprc	ENSKMAP00000002051	ENSKMAP00000005592	CD40 ligand; Belongs to the tumor necrosis factor family.	Protein tyrosine phosphatase receptor type C.	0.414
LOC108231281	tnfsf13b	ENSKMAP00000002051	ENSKMAP00000029645	CD40 ligand; Belongs to the tumor necrosis factor family.	TNF superfamily member 13b; Belongs to the tumor necrosis factor family.	0.835
LOC108233559	card11	ENSKMAP00000010048	ENSKMAP00000021881	MALT paracaspase 1.	Caspase recruitment domain family, member 11.	0.904
LOC108240216	traf3ip2	ENSKMAP00000019270	ENSKMAP00000021450	TRAF3 interacting protein 2-like.	SEFIR domain-containing protein.	0.900
LOC108244322	LOC108250440	ENSKMAP00000026034	ENSKMAP00000008734	BHLH domain-containing protein.	E1A binding protein p300 a.	0.461
LOC108244322	ep300	ENSKMAP00000026034	ENSKMAP00000020640	BHLH domain-containing protein.	E1A binding protein p300 b.	0.461
LOC108250440	LOC108244322	ENSKMAP00000008734	ENSKMAP00000026034	E1A binding protein p300 a.	BHLH domain-containing protein.	0.461
Pou2af1	cd79a	ENSKMAP00000009095	ENSKMAP00000014543	Uncharacterized protein.	CD79a molecule, immunoglobulin-associated alpha.	0.717
Pou2af1	cd79b	ENSKMAP00000009095	ENSKMAP00000008837	Uncharacterized protein.	Ig-like domain-containing protein.	0.677
card11	ENSKMAP00000030182	ENSKMAP00000021881	ENSKMAP00000030182	Caspase recruitment domain family, member 11.	MALT paracaspase 2.	0.904
card11	LOC108233559	ENSKMAP00000021881	ENSKMAP00000010048	Caspase recruitment domain family, member 11.	MALT paracaspase 1.	0.904
card11	cd79a	ENSKMAP00000021881	ENSKMAP00000014543	Caspase recruitment domain family, member 11.	CD79a molecule, immunoglobulin-associated alpha.	0.408
card11	cd79b	ENSKMAP00000021881	ENSKMAP00000008837	Caspase recruitment domain family, member 11.	Ig-like domain-containing protein.	0.613
cd79a	Pou2af1	ENSKMAP00000014543	ENSKMAP00000009095	CD79a molecule, immunoglobulin-associated alpha.	Uncharacterized protein.	0.717
cd79a	card11	ENSKMAP00000014543	ENSKMAP00000021881	CD79a molecule, immunoglobulin-associated alpha.	Caspase recruitment domain family, member 11.	0.408