28 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	srfbp1	Uncharacterized protein. (563 aa)
	mphosph10	U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family. (682 aa)
	bop1	Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (747 aa)
	imp3	IMP U3 small nucleolar ribonucleoprotein 3. (183 aa)
	LOC108231778	Si:ch211-197l9.5. (315 aa)
	LOC108250319	PWP2 small subunit processome component. (909 aa)
	utp4	UTP4 small subunit processome component. (688 aa)
	hunk	Hormonally up-regulated Neu-associated kinase. (657 aa)
	nol6	Nucleolar protein 6. (1150 aa)
	utp20	UTP20 small subunit processome component. (2613 aa)
	Heatr1	BP28CT domain-containing protein. (356 aa)
	fam207a	Family with sequence similarity 207 member A. (250 aa)
	imp4	IMP U3 small nucleolar ribonucleoprotein 4. (291 aa)
	kri1	KRI1 homolog. (767 aa)
	noc4l	Nucleolar complex associated 4 homolog. (525 aa)
	rrp7a	Ribosomal RNA processing 7 homolog A. (304 aa)
	utp18	WD_REPEATS_REGION domain-containing protein. (533 aa)
	nop14	NOP14 nucleolar protein homolog (yeast). (868 aa)
	pes1	Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (581 aa)
	bms1	BMS1 ribosome biogenesis factor. (791 aa)
	wdr36	WD repeat domain 36. (670 aa)
	wdr3	WD repeat domain 3. (931 aa)
	noc2l	NOC2-like nucleolar associated transcriptional repressor. (748 aa)
	tbl3	Transducin (beta)-like 3. (898 aa)
	nop9	PUM-HD domain-containing protein. (614 aa)
	utp6	UTP6 small subunit processome component. (595 aa)
	rsl1d1	Ribosomal L1 domain containing 1. (360 aa)
	wdr12	Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (423 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Heatr1	LOC108250319	ENSKMAP00000011271	ENSKMAP00000004184	BP28CT domain-containing protein.	PWP2 small subunit processome component.	0.999
Heatr1	bms1	ENSKMAP00000011271	ENSKMAP00000029707	BP28CT domain-containing protein.	BMS1 ribosome biogenesis factor.	0.999
Heatr1	bop1	ENSKMAP00000011271	ENSKMAP00000002282	BP28CT domain-containing protein.	Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.868
Heatr1	imp3	ENSKMAP00000011271	ENSKMAP00000002555	BP28CT domain-containing protein.	IMP U3 small nucleolar ribonucleoprotein 3.	0.995
Heatr1	imp4	ENSKMAP00000011271	ENSKMAP00000013988	BP28CT domain-containing protein.	IMP U3 small nucleolar ribonucleoprotein 4.	0.996
Heatr1	kri1	ENSKMAP00000011271	ENSKMAP00000016228	BP28CT domain-containing protein.	KRI1 homolog.	0.451
Heatr1	mphosph10	ENSKMAP00000011271	ENSKMAP00000002180	BP28CT domain-containing protein.	U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family.	0.998
Heatr1	noc2l	ENSKMAP00000011271	ENSKMAP00000022302	BP28CT domain-containing protein.	NOC2-like nucleolar associated transcriptional repressor.	0.890
Heatr1	noc4l	ENSKMAP00000011271	ENSKMAP00000017146	BP28CT domain-containing protein.	Nucleolar complex associated 4 homolog.	0.997
Heatr1	nol6	ENSKMAP00000011271	ENSKMAP00000006346	BP28CT domain-containing protein.	Nucleolar protein 6.	0.999
Heatr1	nop14	ENSKMAP00000011271	ENSKMAP00000020420	BP28CT domain-containing protein.	NOP14 nucleolar protein homolog (yeast).	0.993
Heatr1	nop9	ENSKMAP00000011271	ENSKMAP00000027762	BP28CT domain-containing protein.	PUM-HD domain-containing protein.	0.659
Heatr1	pes1	ENSKMAP00000011271	ENSKMAP00000020603	BP28CT domain-containing protein.	Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.765
Heatr1	rrp7a	ENSKMAP00000011271	ENSKMAP00000018599	BP28CT domain-containing protein.	Ribosomal RNA processing 7 homolog A.	0.998
Heatr1	rsl1d1	ENSKMAP00000011271	ENSKMAP00000029580	BP28CT domain-containing protein.	Ribosomal L1 domain containing 1.	0.945
Heatr1	srfbp1	ENSKMAP00000011271	ENSKMAP00000001419	BP28CT domain-containing protein.	Uncharacterized protein.	0.700
Heatr1	tbl3	ENSKMAP00000011271	ENSKMAP00000027162	BP28CT domain-containing protein.	Transducin (beta)-like 3.	0.999
Heatr1	utp18	ENSKMAP00000011271	ENSKMAP00000018640	BP28CT domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.999
Heatr1	utp20	ENSKMAP00000011271	ENSKMAP00000008092	BP28CT domain-containing protein.	UTP20 small subunit processome component.	0.999
Heatr1	utp4	ENSKMAP00000011271	ENSKMAP00000004705	BP28CT domain-containing protein.	UTP4 small subunit processome component.	0.999