15 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC108228382	JunE proto-oncogene, AP-1 transcription factor subunit. (332 aa)
	ascl1	Achaete-scute family bHLH transcription factor 1a. (206 aa)
	tnr	Tenascin R (restrictin, janusin). (1378 aa)
	ENSKMAP00000011188	Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family. (319 aa)
	LOC108250984	Zmp:0000000846. (1831 aa)
	mycbp2	MYC binding protein 2. (4580 aa)
	LOC108241803	Chondroitin sulfate proteoglycan 5b. (628 aa)
	LOC108250883	Fibrinogen C-terminal domain-containing protein. (283 aa)
	cspg5	Chondroitin sulfate proteoglycan 5a. (606 aa)
	LOC108244439	Growth associated protein 43. (245 aa)
	LOC108232846	Apolipoprotein Da, duplicate 1; Belongs to the calycin superfamily. Lipocalin family. (186 aa)
	LOC108251371	Neurogenin 1. (190 aa)
	LOC108230380	Apolipoprotein Db; Belongs to the calycin superfamily. Lipocalin family. (183 aa)
	tnc	Tenascin C. (1602 aa)
	mtr	Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. (1237 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC108250883	LOC108250984	ENSKMAP00000002490	ENSKMAP00000006966	Fibrinogen C-terminal domain-containing protein.	Zmp:0000000846.	0.942
LOC108250883	tnc	ENSKMAP00000002490	ENSKMAP00000024127	Fibrinogen C-terminal domain-containing protein.	Tenascin C.	0.457
LOC108250883	tnr	ENSKMAP00000002490	ENSKMAP00000014843	Fibrinogen C-terminal domain-containing protein.	Tenascin R (restrictin, janusin).	0.457
LOC108250984	LOC108250883	ENSKMAP00000006966	ENSKMAP00000002490	Zmp:0000000846.	Fibrinogen C-terminal domain-containing protein.	0.942
LOC108250984	tnc	ENSKMAP00000006966	ENSKMAP00000024127	Zmp:0000000846.	Tenascin C.	0.466
LOC108250984	tnr	ENSKMAP00000006966	ENSKMAP00000014843	Zmp:0000000846.	Tenascin R (restrictin, janusin).	0.457
LOC108251371	ascl1	ENSKMAP00000027724	ENSKMAP00000017753	Neurogenin 1.	Achaete-scute family bHLH transcription factor 1a.	0.531
ascl1	LOC108251371	ENSKMAP00000017753	ENSKMAP00000027724	Achaete-scute family bHLH transcription factor 1a.	Neurogenin 1.	0.531
tnc	LOC108250883	ENSKMAP00000024127	ENSKMAP00000002490	Tenascin C.	Fibrinogen C-terminal domain-containing protein.	0.457
tnc	LOC108250984	ENSKMAP00000024127	ENSKMAP00000006966	Tenascin C.	Zmp:0000000846.	0.466
tnc	tnr	ENSKMAP00000024127	ENSKMAP00000014843	Tenascin C.	Tenascin R (restrictin, janusin).	0.467
tnr	LOC108250883	ENSKMAP00000014843	ENSKMAP00000002490	Tenascin R (restrictin, janusin).	Fibrinogen C-terminal domain-containing protein.	0.457
tnr	LOC108250984	ENSKMAP00000014843	ENSKMAP00000006966	Tenascin R (restrictin, janusin).	Zmp:0000000846.	0.457
tnr	tnc	ENSKMAP00000014843	ENSKMAP00000024127	Tenascin R (restrictin, janusin).	Tenascin C.	0.467