STRINGSTRING
nop56 nop56 nop58 nop58 fbl fbl rrp9 rrp9 snu13 snu13 LOC108233996 LOC108233996
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
nop56NOP56 ribonucleoprotein homolog. (560 aa)
nop58NOP58 ribonucleoprotein homolog (yeast). (553 aa)
fblFibrillarin. (309 aa)
rrp9Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein. (480 aa)
snu13Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
LOC108233996Nucleolar and coiled-body phosphoprotein 1. (927 aa)
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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