28 items (Kryptolebias marmoratus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ctsh	Cathepsin H; Belongs to the peptidase C1 family. (324 aa)
	pex2	Peroxisomal biogenesis factor 2. (321 aa)
	ep300	E1A binding protein p300 b. (2785 aa)
	LOC108247643	CREB binding protein b. (2428 aa)
	LOC108251202	Nuclear receptor subfamily 1, group d, member 1. (604 aa)
	fbxo4	F-box protein 4. (395 aa)
	LOC112450251	Huluwa. (265 aa)
	LOC108242388	F-box and WD repeat domain containing 11a. (588 aa)
	utp25	UTP25 small subunit processor component. (824 aa)
	sirt1	Sirtuin 1. (693 aa)
	rnf139	Ring finger protein 139. (715 aa)
	sirt6	Sirtuin 6. (350 aa)
	LOC108250440	E1A binding protein p300 a. (2399 aa)
	isoc2	Isochorismatase domain containing 2. (206 aa)
	cdc73	Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae). (530 aa)
	mul1	Mitochondrial E3 ubiquitin protein ligase 1b. (352 aa)
	Prkn	RBR-type E3 ubiquitin transferase. (174 aa)
	xbp1	X-box binding protein 1. (263 aa)
	LOC108240497	CULLIN_2 domain-containing protein; Belongs to the cullin family. (767 aa)
	ENSKMAP00000001780	Golgi associated, gamma adaptin ear containing, ARF binding protein 3a. (512 aa)
	gga3	Golgi associated, gamma adaptin ear containing, ARF binding protein 3b. (716 aa)
	LOC108237393	Uncharacterized protein; Belongs to the peptidase C1 family. (321 aa)
	LOC108235787	Nuclear receptor subfamily 1, group D, member 4b. (559 aa)
	serf2	Small EDRK-rich factor 2. (62 aa)
	htt	Huntingtin. (3092 aa)
	derl1	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. (258 aa)
	CUL3	Cullin 3; Belongs to the cullin family. (766 aa)
	LOC108241482	CREB binding protein a. (2490 aa)

Your Current Organism:

Kryptolebias marmoratus

NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUL3	LOC108240497	ENSKMAP00000027871	ENSKMAP00000002393	Cullin 3; Belongs to the cullin family.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.900
CUL3	LOC108242388	ENSKMAP00000027871	ENSKMAP00000012468	Cullin 3; Belongs to the cullin family.	F-box and WD repeat domain containing 11a.	0.947
CUL3	fbxo4	ENSKMAP00000027871	ENSKMAP00000017959	Cullin 3; Belongs to the cullin family.	F-box protein 4.	0.709
ENSKMAP00000001780	derl1	ENSKMAP00000001780	ENSKMAP00000029372	Golgi associated, gamma adaptin ear containing, ARF binding protein 3a.	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	0.408
LOC108240497	CUL3	ENSKMAP00000002393	ENSKMAP00000027871	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Cullin 3; Belongs to the cullin family.	0.900
LOC108240497	LOC108242388	ENSKMAP00000002393	ENSKMAP00000012468	CULLIN_2 domain-containing protein; Belongs to the cullin family.	F-box and WD repeat domain containing 11a.	0.947
LOC108240497	fbxo4	ENSKMAP00000002393	ENSKMAP00000017959	CULLIN_2 domain-containing protein; Belongs to the cullin family.	F-box protein 4.	0.709
LOC108241482	LOC108247643	ENSKMAP00000026436	ENSKMAP00000019200	CREB binding protein a.	CREB binding protein b.	0.901
LOC108241482	LOC108250440	ENSKMAP00000026436	ENSKMAP00000008734	CREB binding protein a.	E1A binding protein p300 a.	0.928
LOC108241482	ep300	ENSKMAP00000026436	ENSKMAP00000020640	CREB binding protein a.	E1A binding protein p300 b.	0.992
LOC108241482	htt	ENSKMAP00000026436	ENSKMAP00000029524	CREB binding protein a.	Huntingtin.	0.775
LOC108241482	sirt1	ENSKMAP00000026436	ENSKMAP00000011175	CREB binding protein a.	Sirtuin 1.	0.597
LOC108242388	CUL3	ENSKMAP00000012468	ENSKMAP00000027871	F-box and WD repeat domain containing 11a.	Cullin 3; Belongs to the cullin family.	0.947
LOC108242388	LOC108240497	ENSKMAP00000012468	ENSKMAP00000002393	F-box and WD repeat domain containing 11a.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.947
LOC108247643	LOC108241482	ENSKMAP00000019200	ENSKMAP00000026436	CREB binding protein b.	CREB binding protein a.	0.901
LOC108247643	LOC108250440	ENSKMAP00000019200	ENSKMAP00000008734	CREB binding protein b.	E1A binding protein p300 a.	0.928
LOC108247643	ep300	ENSKMAP00000019200	ENSKMAP00000020640	CREB binding protein b.	E1A binding protein p300 b.	0.992
LOC108247643	htt	ENSKMAP00000019200	ENSKMAP00000029524	CREB binding protein b.	Huntingtin.	0.775
LOC108247643	sirt1	ENSKMAP00000019200	ENSKMAP00000011175	CREB binding protein b.	Sirtuin 1.	0.597
LOC108250440	LOC108241482	ENSKMAP00000008734	ENSKMAP00000026436	E1A binding protein p300 a.	CREB binding protein a.	0.928